Evidence map›Paper›PMID 33674787›Full record

ArticleCommunications biology2021

Conservation of the glycogen metabolism pathway underlines a pivotal function of storage polysaccharides in Chlamydiae.

Matthieu Colpaert, Derifa Kadouche, Mathieu Ducatez, Trestan Pillonel, Carole Kebbi-Beghdadi, Ugo Cenci, Binquan Huang, Malika Chabi, Emmanuel Maes, Bernadette Coddeville and 7 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
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  6. Review
  7. Article
  8. Cell adaptation of the extremophilic red microalgaFrontiers in plant science · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 3 countries.

Matthieu ColpaertUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.ORCID http://orcid.org/0000-0002-2504-6043
Derifa Kadouche *University of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Mathieu Ducatez *University of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Trestan PillonelInstitute of Microbiology, University of Lausanne and University Hospital Center, Lausanne, Switzerland.ORCID http://orcid.org/0000-0002-5725-7929
Carole Kebbi-BeghdadiInstitute of Microbiology, University of Lausanne and University Hospital Center, Lausanne, Switzerland.
Ugo CenciUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Binquan HuangUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Malika ChabiUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Emmanuel MaesUniversity of Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US 41 - UMS 2014 - PLBS, Lille, France.
Bernadette CoddevilleUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Loïc CoudercUniversity of Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US 41 - UMS 2014 - PLBS, Lille, France.
Hélène TouzetUniversity of Lille, CNRS, Centrale Lille, UMR 9189 - CRIStAL - Centre de Recherche en Informatique Signal et Automatique de Lille, Lille, France.
Fabrice BrayUniversity of Lille, CNRS, USR 3290-MSAP-Miniaturisation pour la Synthèse, l'Analyse et la Protéomique, Lille, France.
Catherine TirtiauxUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Steven BallUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France.
Gilbert GreubInstitute of Microbiology, University of Lausanne and University Hospital Center, Lausanne, Switzerland.ORCID http://orcid.org/0000-0001-9529-3317
Christophe ColleoniUniversity of Lille, CNRS, UMR8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France. christophe.colleoni@univ-lille.fr.ORCID http://orcid.org/0000-0002-6534-6120
Centre National de la Recherche Scientifique · FRUniversity of Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The order Chlamydiales includes obligate intracellular pathogens capable of infecting mammals, fishes and amoeba. Unlike other intracellular bacteria for which intracellular adaptation led to the loss of glycogen metabolism pathway, all chlamydial families maintained the nucleotide-sugar dependent glycogen metabolism pathway i.e. the GlgC-pathway with the notable exception of both Criblamydiaceae and Waddliaceae families. Through detailed genome analysis and biochemical investigations, we have shown that genome rearrangement events have resulted in a defective GlgC-pathway and more importantly we have evidenced a distinct trehalose-dependent GlgE-pathway in both Criblamydiaceae and Waddliaceae families. Altogether, this study strongly indicates that the glycogen metabolism is retained in all Chlamydiales without exception, highlighting the pivotal function of storage polysaccharides, which has been underestimated to date. We propose that glycogen degradation is a mandatory process for fueling essential metabolic pathways that ensure the survival and virulence of extracellular forms i.e. elementary bodies of Chlamydiales.

Indexed as

GlycogenolysisChlamydialesEvolution, MolecularGene Expression Regulation, BacterialGenome, BacterialGlycogenKineticsPhylogenyPolysaccharides, BacterialVirulenceGlycogenPolysaccharides, Bacterial

Identifiers

PMID33674787
PMCPMC7935935
OpenAlexW3135063396

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.