Evidence map›Paper›PMID 33674659›Full record

ArticleScientific reports2021

Population imaging discrepancies between a genetically-encoded calcium indicator (GECI) versus a genetically-encoded voltage indicator (GEVI).

Mei Hong Zhu, Jinyoung Jang, Milena M Milosevic, Srdjan D Antic

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  6. Chronic alteration of CabioRxiv : the preprint server for biology · 2025
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  7. Review
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  14. Scanless two-photon voltage imaging.Nature communications · 2024
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. How far neuroscience is from understanding brains.Frontiers in systems neuroscience · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mei Hong ZhuInstitute for Systems Genomics, Department of Neuroscience, UConn School of Medicine, Farmington, CT, 06030, USA.
Jinyoung JangInstitute for Systems Genomics, Department of Neuroscience, UConn School of Medicine, Farmington, CT, 06030, USA.
Milena M MilosevicInstitute for Systems Genomics, Department of Neuroscience, UConn School of Medicine, Farmington, CT, 06030, USA.
Srdjan D AnticInstitute for Systems Genomics, Department of Neuroscience, UConn School of Medicine, Farmington, CT, 06030, USA. antic@uchc.edu.
University of Connecticut · USInstitute for Systems Biology · US

Funding

Near Infrared Genetically Encoded Voltage Indicators (NIR-GEVIs) for All-Optical Electrophysiology (AOE)U01NS099573 · NINDS · IMPERIAL COLLEGE OF SCIENCE, TECHNOLOGY AND MEDICINE · PI ANTIC, SRDJAN D, KNOPFEL, THOMAS · 2016 to 2018
$2.9M
Population Network Responses in AD Model AnimalsR21AG064554 · NIA · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI ANTIC, SRDJAN D, YAN, RIQIANG · 2020 to 2021
$451k
NIA NIH HHS R21 AG064554NINDS NIH HHS U01 NS099573
6 · The paper itself

Abstract

Genetically-encoded calcium indicators (GECIs) are essential for studying brain function, while voltage indicators (GEVIs) are slowly permeating neuroscience. Fundamentally, GECI and GEVI measure different things, but both are advertised as reporters of "neuronal activity". We quantified the similarities and differences between calcium and voltage imaging modalities, in the context of population activity (without single-cell resolution) in brain slices. GECI optical signals showed 8-20 times better SNR than GEVI signals, but GECI signals attenuated more with distance from the stimulation site. We show the exact temporal discrepancy between calcium and voltage imaging modalities, and discuss the misleading aspects of GECI imaging. For example, population voltage signals already repolarized to the baseline (~ disappeared), while the GECI signals were still near maximum. The region-to-region propagation latencies, easily captured by GEVI imaging, are blurred in GECI imaging. Temporal summation of GECI signals is highly exaggerated, causing uniform voltage events produced by neuronal populations to appear with highly variable amplitudes in GECI population traces. Relative signal amplitudes in GECI recordings are thus misleading. In simultaneous recordings from multiple sites, the compound EPSP signals in cortical neuropil (population signals) are less distorted by GEVIs than by GECIs.

Indexed as

AnimalsBrainCalciumCalcium SignalingFemaleIndicators and ReagentsMaleMembrane PotentialsMiceMice, TransgenicNeuronsSignal-To-Noise RatioVoltage-Sensitive Dye ImagingCalciumIndicators and Reagents

Identifiers

PMID33674659
PMCPMC7935943
OpenAlexW3134156842

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.