Evidence map›Paper›PMID 33674625›Full record

ArticleScientific reports2021

RNA-seq and GSEA identifies suppression of ligand-gated chloride efflux channels as the major gene pathway contributing to form deprivation myopia.

Loretta Giummarra Vocale, Sheila Crewther, Nina Riddell, Nathan E Hall, Melanie Murphy, David Crewther

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. The potential role of amino acids in myopia: inspiration from metabolomics.Metabolomics : Official journal of the Metabolomic Society · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. The Role of Retinal Dysfunction in Myopia Development.Cellular and molecular neurobiology · 2023
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Loretta Giummarra VocaleDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia. Loretta.vocale@rmit.edu.au.
Sheila CrewtherDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia.
Nina RiddellDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia.
Nathan E HallDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia.
Melanie MurphyDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia.
David CrewtherDepartment of Psychology and Counselling, La Trobe University, Melbourne, VIC, Australia.
La Trobe University · AUSwinburne University of Technology · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Currently there is no consensus regarding the aetiology of the excessive ocular volume that characterizes high myopia. Thus, we aimed to test whether the gene pathways identified by gene set enrichment analysis of RNA-seq transcriptomics refutes the predictions of the Retinal Ion Driven Efflux (RIDE) hypothesis when applied to the induction of form-deprivation myopia (FDM) and subsequent recovery (post-occluder removal). We found that the induction of profound FDM led to significant suppression in the ligand-gated chloride ion channel transport pathway via suppression of glycine, GABA

Indexed as

AnimalsChickensChloride ChannelsChloridesDisease Models, AnimalGlycineIonsLigandsMaleMyopiaReceptors, GABAReceptors, GABA-ARefraction, OcularRetinaRetinal Cone Photoreceptor CellsRNA-SeqChloride ChannelsChloridesGABA-C receptorGlycineIonsLigandsReceptors, GABAReceptors, GABA-A

Identifiers

PMID33674625
PMCPMC7935918
OpenAlexW3134395356

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.