Evidence map›Paper›PMID 33671853›Full record

ArticleJournal of personalized medicine2021

Deep Learning for Integrated Analysis of Insulin Resistance with Multi-Omics Data.

Eunchong Huang, Sarah Kim, TaeJin Ahn

Open access · goldAbstract read
In one paragraph

Article in Journal of personalized medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 10 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Eunchong HuangDepartment of Advanced Green Energy and Environment, Handong Global University, Pohang-si, Gyeongbuk 37554, Korea.ORCID 0000-0003-3760-6164
Sarah KimDepartment of Life Science, Handong Global University, Pohang-si, Gyeonbuk 37554, Korea.
TaeJin AhnDepartment of Life Science, Handong Global University, Pohang-si, Gyeonbuk 37554, Korea.ORCID 0000-0001-5165-2744
Handong Global University · KR

Funding

This research is supported through the Ministry of Trade, Industry and Energy(MOTIE) P0009477, 2020
6 · The paper itself

Abstract

Technological advances in next-generation sequencing (NGS) have made it possible to uncover extensive and dynamic alterations in diverse molecular components and biological pathways across healthy and diseased conditions. Large amounts of multi-omics data originating from emerging NGS experiments require feature engineering, which is a crucial step in the process of predictive modeling. The underlying relationship among multi-omics features in terms of insulin resistance is not well understood. In this study, using the multi-omics data of type II diabetes from the Integrative Human Microbiome Project, from 10,783 features, we conducted a data analytic approach to elucidate the relationship between insulin resistance and multi-omics features, including microbiome data. To better explain the impact of microbiome features on insulin classification, we used a developed deep neural network interpretation algorithm for each microbiome feature's contribution to the discriminative model output in the samples.

Indexed as

feature engineeringfeature reductionmicrobiomemulti-omicsprediction model

Identifiers

PMID33671853
PMCPMC7918166
OpenAlexW3131865797

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.