ArticlePathogens (Basel, Switzerland)2021
Amplicon-Based Next Generation Sequencing for Rapid Identification of
Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
15 citing papers in PubMed, 16 citations in OpenAlex.
- Phylogenetic, genomic and morphological characterization ofInternational journal of systematic and evolutionary microbiology · 2026Article
- Molecular detection of zoonotic pathogens in fleas collected from dogs and cats in Portugal.Parasites & vectors · 2026Article
- Bacterial communities in Thai ticks: revealing geographical and methodological gaps in surveillance-a 25-year scoping review.Tropical medicine and health · 2026Review
- Molecular characterization of the oriental cat flea,Current research in parasitology & vector-borne diseases · 2025Article
- Tick-, flea- and mite-borne pathogens and associated diseases of public health importance in Bangladesh: a review.Infectious medicine · 2024Review
- Molecular detection and genetic characterization of hemotropic mycoplasmas in goats and fleas from Thailand.Scientific reports · 2024Article
- Review
- Case Report: Cardiovascular Manifestations due to Flea-Borne Typhus.The American journal of tropical medicine and hygiene · 2024Review
- History and Current Status of Mediterranean Spotted Fever (MSF) in the Crimean Peninsula and Neighboring Regions along the Black Sea Coast.Pathogens (Basel, Switzerland) · 2023Review
- An overview of the trypanosomatid (Kinetoplastida: Trypanosomatidae) parasites infecting several mammal species in Colombia.Parasites & vectors · 2022Article
- The bacterial biome of ticks and their wildlife hosts at the urban-wildland interface.Microbial genomics · 2021Article
- Development of an Amplicon-Based Next-Generation Sequencing Protocol to IdentifyMicrobiology spectrum · 2021Article
- An Update on the Laboratory Diagnosis ofPathogens (Basel, Switzerland) · 2021Review
- Ticks and Tick-Borne Pathogens in Domestic Animals, Wild Pigs, and Off-Host Environmental Sampling in Guam, USA.Frontiers in veterinary science · 2021Article
- The Bacterial Community in Questing Ticks From Khao Yai National Park in Thailand.Frontiers in veterinary science · 2021Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundNext generation sequencing (NGS) technology has been used for a wide range of epidemiological and surveillance studies. Here, we used amplicon-based NGS to species identify
methodsDuring 2015-2016, we screened 1825 samples of rodents and ectoparasites collected from rodents and domestic mammals (dog, cat, and cattle) across Thailand for
resultThe highest percentage of
conclusionThis study demonstrates the utility of NGS for high-throughput sequencing in the species characterization/identification of bacteria and ectoparasite for entomological surveillance of rickettsiae. A high percentage of
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.