Evidence map›Paper›PMID 33668339›Full record

ArticlePathogens (Basel, Switzerland)2021

Evaluation of a Trio Toscana Virus Real-Time RT-PCR Assay Targeting Three Genomic Regions within Nucleoprotein Gene.

Laurence Thirion, Laura Pezzi, Irene Pedrosa-Corral, Sara Sanbonmatsu-Gamez, Xavier de Lamballerie, Alessandra Falchi, Mercedes Perez-Ruiz, Remi N Charrel

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Laurence ThirionUnité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), 13005 Marseille.ORCID 0000-0003-4301-2944
Laura PezziUnité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), 13005 Marseille.ORCID 0000-0001-7921-9221
Irene Pedrosa-CorralServicio de Microbiología, Instituto de Investigación Biosanitaria ibs.Granada, Hospital Universitario Virgen de las Nieves, 18014 Granada, Spain.
Sara Sanbonmatsu-GamezServicio de Microbiología, Instituto de Investigación Biosanitaria ibs.Granada, Hospital Universitario Virgen de las Nieves, 18014 Granada, Spain.
Xavier de LamballerieUnité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), 13005 Marseille.
Alessandra FalchiUR7310, Laboratoire de Virologie, Université de Corse-Inserm, 20250 Corte, France.
Mercedes Perez-RuizServicio de Microbiología, Instituto de Investigación Biosanitaria ibs.Granada, Hospital Universitario Virgen de las Nieves, 18014 Granada, Spain.
Remi N CharrelUnité des Virus Émergents (UVE: Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), 13005 Marseille.ORCID 0000-0002-7675-8251
Inserm · FRInstituto de Investigación Biosanitaria de Granada · ESUniversité de Corse Pascal Paoli · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toscana virus (TOSV) can cause central nervous system infections in both residents of and travelers to Mediterranean countries. Data mining identified three real-time RT-qPCR assays for detecting TOSV RNA targeting non-overlapping regions in the nucleoprotein gene. Here, they were combined to create a multi-region assay named Trio TOSV RT-qPCR consisting of six primers and three probes. In this study, (i) we evaluated in silico the three RT-qPCR assays available in the literature for TOSV detection, (ii) we combined the three systems to create the Trio TOSV RT-qPCR, (iii) we assessed the specificity and sensitivity of the three monoplex assays versus the Trio TOSV RT-qPCR assay, and (iv) we compared the performance of the Trio TOSV RT-qPCR assay with one of the reference monoplex assays on clinical samples. In conclusion, the Trio TOSV RT-qPCR assay performs equally or better than the three monoplex assays; therefore, it provides a robust assay that can be used for both research and diagnostic purposes.

Indexed as

arbovirusdiagnosticsMediterraneanmeningitisPhenuiviridaePhlebotomusPhlebovirussand fly

Identifiers

PMID33668339
PMCPMC7996202
OpenAlexW3132868863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.