Evidence map›Paper›PMID 33668324›Full record

ArticleInternational journal of molecular sciences2021

FOXC1 Downregulates Nanog Expression by Recruiting HDAC2 to Its Promoter in F9 Cells Treated by Retinoic Acid.

Hongni Xue, Fayang Liu, Zhiying Ai, Jie Ke, Mengying Yu, Bingxue Chen, Zekun Guo

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hongni XueCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Fayang LiuCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Zhiying AiCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Jie KeCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Mengying YuCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Bingxue ChenCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Zekun GuoCollege of Veterinary Medicine, Northwest A&F University, Yangling 712100, Shaanxi, China.
Northwest A&F University · CN

Funding

National Natural Science Foundation of China 31872355
6 · The paper itself

Abstract

FOXC1, a transcription factor involved in cell differentiation and embryogenesis, is demonstrated to be a negative regulator of Nanog in this study. FOXC1 is up-regulated in retinoic acid-induced differentiation of F9 Embryonal Carcinoma (EC) cells; furthermore, FOXC1 specifically inhibits the core pluripotency factor Nanog by binding to the proximal promoter. Overexpression of FOXC1 in F9 or knockdown in 3T3 results in the down-regulation or up-regulation of Nanog mRNA and proteins, respectively. In order to explain the mechanism by which FOXC1 inhibits Nanog expression, we identified the co-repressor HDAC2 from the FOXC1 interactome. FOXC1 recruits HDAC2 to Nanog promoter to decrease H3K27ac enrichment, resulting in transcription inhibition of Nanog. To the best of our knowledge, this is the first report that FOXC1 is involved in the epigenetic regulation of gene expression.

Indexed as

Promoter Regions, GeneticAnimalsAntineoplastic AgentsEmbryonal Carcinoma Stem CellsEpigenesis, GeneticForkhead Transcription FactorsGene Expression Regulation, NeoplasticHEK293 CellsHistone Deacetylase 2HumansMiceNanog Homeobox ProteinNIH 3T3 CellsTretinoinAntineoplastic AgentsForkhead Transcription FactorsFOXC1 protein, humanHDAC2 protein, humanHistone Deacetylase 2Nanog Homeobox ProteinNANOG protein, humanTretinoinARTAF9 cellsFOXC1 interactomeHDAC2Nanogpromoter analysis

Identifiers

PMID33668324
PMCPMC7956269
OpenAlexW3131591698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.