Evidence map›Paper›PMID 33668196›Full record

ArticleGenes2021

Autochthonous Austrian Varieties of Prunus avium L. Represent a Regional Gene Pool, Assessed Using SSR and AFLP Markers.

Elisabeth Schüller, Felicidad Fernández Fernández, Laima Antanaviciute, Ulrike Anhalt-Brüderl, Andreas Spornberger, Astrid Forneck

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Elisabeth SchüllerDivision of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna Gregor-Mendel-Strasse 33, 1180 Vienna, Austria.ORCID 0000-0002-8666-8786
Felicidad Fernández FernándezGenetics, Genomics and Breeding Department, NIAB EMR, New Road, East Malling, Kent ME19 6BJ, UK.
Laima AntanaviciuteQIAGEN, 19300 Germantown Road, Germantown, MD 20874, USA.
Ulrike Anhalt-BrüderlDivision of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna Gregor-Mendel-Strasse 33, 1180 Vienna, Austria.
Andreas SpornbergerDivision of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna Gregor-Mendel-Strasse 33, 1180 Vienna, Austria.
Astrid ForneckDivision of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna Gregor-Mendel-Strasse 33, 1180 Vienna, Austria.
BOKU University · ATEast Malling Research (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sweet cherry production faces new challenges that necessitate the exploitation of genetic resources such as varietal collections and landraces in breeding programs. A harmonized approach to characterization is key for an optimal utilization of germplasm in breeding. This study reports the genotyping of 63 sweet cherry accessions using a harmonized set of 11 simple sequence repeat (SSR) markers optimized in two multiplexed PCR reactions. Thirty-eight distinct allelic profiles were identified. The set of SSR markers chosen proved highly informative in these germplasm; an average of 6.3 alleles per locus, a PIC value of 0.59 and above-average expected and observed heterozygosity levels were detected. Additionally, 223 amplified fragment length polymorphism (AFLP) markers derived from eight selective primer combinations were employed to further differentiate 17 closely related accessions, confirming the SSR analysis. Genetic relationships between internationally known old cultivars were revealed: SSR fingerprints of "Schneiders Späte Knorpelkirsche" and "Germersdorfer" were found to be identical to those of the standard cultivar "Noire de Meched", among others, whereas four accessions known as "Hedelfinger Riesenkirsche" and four known as "Große Schwarze Knorpelkirsche" showed allelic differences at various loci. The genetic diversity of locally-grown cultivars worldwide might be currently underestimated. Several autochthonous Austrian sweet cherry germplasm accessions were genotyped for the first time and their genetic relationships analyzed and discussed. Interestingly, seven Austrian sweet cherry landraces were shown to be clearly genetically separated from international and modern varieties, indicating that Austrian germplasm could include valuable genetic resources for future breeding efforts.

Indexed as

Amplified Fragment Length Polymorphism AnalysisGene PoolMicrosatellite RepeatsAustriaGenetic MarkersPrunus aviumGenetic Markersamplified fragment length polymorphism (AFLP)Austrian germplasmautochthonous varietiesbreedinggenetic diversityPrunus aviumsimple sequence repeat (SSR)sweet cherry

Identifiers

PMID33668196
PMCPMC7995972
OpenAlexW3132247745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.