Evidence map›Paper›PMID 33667269›Full record

ArticlePloS one2021

Genetic impacts on thermostability of onco-lncRNA HOTAIR during the development and progression of endometriosis.

Cherry Yin-Yi Chang, Chung-Chen Tseng, Ming-Tsung Lai, An-Jen Chiang, Lun-Chien Lo, Chih-Mei Chen, Man-Ju Yen, Li Sun, Li Yang, Tritium Hwang and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The Role of Long Non-Coding RNAs in Endometriosis.International journal of molecular sciences · 2021
    Review
  9. Review
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Cherry Yin-Yi ChangDepartment of Obstetrics and Gynecology, China Medical University Hospital, Taichung, Taiwan.
Chung-Chen TsengInstitute of Biomedical Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan.
Ming-Tsung LaiDepartment of Pathology, Taichung Hospital, Ministry of Health and Welfare, Taichung, Taiwan.
An-Jen ChiangInstitute of Biomedical Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan.
Lun-Chien LoSchool of Chinese Medicine, China Medical University, Taichung, Taiwan.
Chih-Mei ChenHuman Genetic Center, China Medical University Hospital, Taichung, Taiwan.
Man-Ju YenInstitute of Biomedical Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan.
Li SunDepartment of Gynecological Oncology, Qingdao Central Hospital, The Second Affiliated Hospital of Medical College of Qingdao University, Qingdao, People's Republic of China.
Li YangDepartment of Gynecology, The Third Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Tritium HwangInstitute of Biomedical Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan.
Fuu-Jen TsaiSchool of Chinese Medicine, China Medical University, Taichung, Taiwan.
Jim Jinn-Chyuan SheuInstitute of Biomedical Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan.ORCID 0000-0003-2088-5822
National Sun Yat-sen University · TWChina Medical University · TWMinistry of Health and Welfare · TWQingdao University · CNThird Affiliated Hospital of Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HOTAIR is a well-known long non-coding RNA (lncRNA) involved in various cellular signaling, whereas its functional impacts on endometriosis development are still largely unknown. To this end, six potential functional single nucleotide polymorphisms (SNPs) in HOTAIR, with minor allele frequencies more than 10% in Han population and altered net energy of RNA structures larger than 0.5 kcal/mol, were selected for genotyping study. The study included 207 endometriosis patients and 200 healthy women. Genetic substitutions at rs1838169 and rs17720428 were frequently found in endometriosis patients, and rs1838169 showed statistical significance (p = 0.0174). The G-G (rs1838169-rs17720428) haplotype showed the most significant association with endometriosis (p < 0.0001) with enhanced HOTAIR stability, and patients who harbor such haplotype tended to show higher CA125. Data mining further revealed higher mRNA HOTAIR levels in the endometria of patients with severe endometriosis which consistently showed reduced HOXD10 and HOXA5 levels. HOTAIR knockdown with specific shRNAs down-regulated cell proliferation and migration with the induction of HOXD10 and HOXA5 expression in human ovarian clear cancer cells. Our study therefore provided evidence to indicate a prominent role of HOTAIR in promoting endometriosis, which could be used as a potential target for clinical applications.

Indexed as

EndometriosisGene Expression RegulationPolymorphism, Single NucleotideRNA, Long NoncodingCell Line, TumorFemaleHomeodomain ProteinsHumansRNA StabilityTranscription FactorsHomeodomain ProteinsHOTAIR long untranslated RNA, humanHOXA5 protein, humanHOXD10 protein, humanRNA, Long NoncodingTranscription Factors

Identifiers

PMID33667269
PMCPMC7935326
OpenAlexW3135846059

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.