Evidence map›Paper›PMID 33666852›Full record

ArticleMolecular biotechnology2021

Effects of Light Regulation on Proteome Expression in Rhodobacter sphaeroides 2.4.1.

Jae-Min Park, Hyun-Jeong Lee, Jinhee Ahn, Simranjeet Singh Sekhon, Sang Yong Kim, Ji-Hyang Wee, Jiho Min, Ji-Young Ahn, Yang-Hoon Kim

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 65% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jae-Min ParkSchool of Biological Sciences, Chungbuk National University, 1 Chungdae-Ro, Seowon-Gu, Cheongju, 28644, South Korea.
Hyun-Jeong LeeGraduate School of Semiconductor and Chemical Engineering, Jeonbuk National University, 567 Baekje-daero, Deokjin-gu, 54896, Jeonju-si, Jeollabuk-do, South Korea.
Jinhee AhnMEDICA KOREA Co., Ltd., 704ho, 2558, Nambusunhwan-ro, Seocho-gu, Seoul, 06750, South Korea.
Simranjeet Singh SekhonSchool of Biological Sciences, Chungbuk National University, 1 Chungdae-Ro, Seowon-Gu, Cheongju, 28644, South Korea.
Sang Yong KimDepartment of Food Science and Biotechnology, Shin Ansan University, 135 Sinansandaehak-Ro, Danwon-Gu, 15435, Ansan, South Korea.
Ji-Hyang WeeDepartment of Food Science and Biotechnology, Shin Ansan University, 135 Sinansandaehak-Ro, Danwon-Gu, 15435, Ansan, South Korea.
Jiho MinGraduate School of Semiconductor and Chemical Engineering, Jeonbuk National University, 567 Baekje-daero, Deokjin-gu, 54896, Jeonju-si, Jeollabuk-do, South Korea. jihomin@jbnu.ac.kr.
Ji-Young AhnSchool of Biological Sciences, Chungbuk National University, 1 Chungdae-Ro, Seowon-Gu, Cheongju, 28644, South Korea. jyahn@chungbuk.ac.kr.ORCID http://orcid.org/0000-0002-3729-2284
Yang-Hoon KimSchool of Biological Sciences, Chungbuk National University, 1 Chungdae-Ro, Seowon-Gu, Cheongju, 28644, South Korea. kyh@chungbuk.ac.kr.
Chungbuk National University · KRJeonbuk National University · KRShin Ansan University · KR

Funding

NRF 2020R1A6A1A06046235NRF NRF-2019R1A2C1010860
6 · The paper itself

Abstract

Light plays an important role in the transcriptional regulation of photosynthetic apparatus. The influence of oxygen and light conditions on the protein expression of Rhodobacter sphaeroides was investigated using a proteomic approach. The R. sphaeroides was grown aerobically under dark cultivation (D24) and light cultivation (L24) for 24 h. An average of 950 distinguishable spots were obtained on 2-D analytic gel for D24 and L24 conditions, of which 48 proteins exhibited significant changes in protein expression levels. Among the 48, 31 proteins were upregulated and 17 proteins were downregulated in L24 when compared with D24. The results depict the comparative protein expression in R. sphaeroides mediated through growth under light or dark conditions. The data suggest that the overexpressed proteins, phosphoribosyl-ATP pyrophosphatase (HisE), in the D24/aerobic culture are involved in the positive regulation of PAC production can be functionally applied in metabolic engineering and industrial processes.

Indexed as

LightElectrophoresis, Gel, Two-DimensionalPhotosynthesisProteomeProteomicsRhodobacter sphaeroidesTandem Mass SpectrometryProteomeComparative proteomicsMetabolic characteristicsPhotosynthesisProteomic responsesRhodobacter sphaeroidesTwo-dimensional gel electrophoresis

Identifiers

PMID33666852
OpenAlexW3134178752

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.