Evidence map›Paper›PMID 33666823›Full record

ArticleNeuroinformatics2021

Identification of Neuronal Polarity by Node-Based Machine Learning.

Chen-Zhi Su, Kuan-Ting Chou, Hsuan-Pei Huang, Chiau-Jou Li, Ching-Che Charng, Chung-Chuan Lo, Daw-Wei Wang

Abstract read
In one paragraph

Article in Neuroinformatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chen-Zhi Su *Brain Research Center, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Kuan-Ting Chou *Brain Research Center, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Hsuan-Pei HuangInstitute of Systems Neuroscience, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Chiau-Jou LiBrain Research Center, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Ching-Che CharngInstitute of Systems Neuroscience, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Chung-Chuan LoBrain Research Center, National Tsing Hua University, Hsinchu, 30013, Taiwan. cclo@mx.nthu.edu.tw.
Daw-Wei WangPhysics Division, National Center for Theoretical Sciences, Hsinchu, 30013, Taiwan. dwwang@phys.nthu.edu.tw.ORCID 0000-0001-8160-6570

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying the direction of signal flows in neural networks is important for understanding the intricate information dynamics of a living brain. Using a dataset of 213 projection neurons distributed in more than 15 neuropils of a Drosophila brain, we develop a powerful machine learning algorithm: node-based polarity identifier of neurons (NPIN). The proposed model is trained only by information specific to nodes, the branch points on the skeleton, and includes both Soma Features (which contain spatial information from a given node to a soma) and Local Features (which contain morphological information of a given node). After including the spatial correlations between nodal polarities, our NPIN provided extremely high accuracy (>96.0%) for the classification of neuronal polarity, even for complex neurons with more than two dendrite/axon clusters. Finally, we further apply NPIN to classify the neuronal polarity of neurons in other species (Blowfly and Moth), which have much less neuronal data available. Our results demonstrate the potential of NPIN as a powerful tool to identify the neuronal polarity of insects and to map out the signal flows in the brain's neural networks if more training data become available in the future.

Indexed as

AxonsNeuronsCell BodyMachine LearningNeural Networks, ComputerAxonConnectomeDendriteDrosophilaMachine learningNeuronal polarity

Identifiers

PMID33666823
PMCPMC8566381

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.