Evidence map›Paper›PMID 33665032›Full record

ArticlePeerJ2021

A community perspective on the concept of marine holobionts: current status, challenges, and future directions.

Simon M Dittami, Enrique Arboleda, Jean-Christophe Auguet, Arite Bigalke, Enora Briand, Paco Cárdenas, Ulisse Cardini, Johan Decelle, Aschwin H Engelen, Damien Eveillard and 21 more

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 92 citations in OpenAlex.

  1. Pooled it
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  14. The archaeal classmBio · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 20 institutions in 13 countries.

Simon M DittamiIntegrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Enrique ArboledaFR2424, Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Jean-Christophe AuguetMARBEC, Université de Montpellier, CNRS, IFREMER, IRD, Montpellier, France.
Arite BigalkeInstitute for Inorganic and Analytical Chemistry, Bioorganic Analytics, Friedrich-Schiller-Universität Jena, Jena, Germany.
Enora BriandLaboratoire Phycotoxines, Ifremer, Nantes, France.
Paco CárdenasPharmacognosy, Department of Medicinal Chemistry, Uppsala University, Uppsala, Sweden.
Ulisse CardiniIntegrative Marine Ecology Dept, Stazione Zoologica Anton Dohrn, Napoli, Italy.
Johan DecelleLaboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, CNRS, CEA, INRA, Grenoble, France.
Aschwin H EngelenCCMAR, Universidade do Algarve, Faro, Portugal.
Damien EveillardLaboratoire des Sciences Numériques de Nantes (LS2N), Université de Nantes, CNRS, Nantes, France.
Claire M M GachonScottish Marine Institute, Scottish Association for Marine Science, Oban, United Kingdom.
Sarah M GriffithsSchool of Science and the Environment, Manchester Metropolitan University, Manchester, United Kingdom.
Tilmann HarderUniversity of Bremen, Bremen, Germany.
Ehsan KayalFR2424, Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Elena KazamiaInstitut de Biologie, ENS, Paris, France.
François H LallierAdaptation and Diversity in the Marine Environment, Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Mónica MedinaDepartment of Biology, Pennsylvania State University, University Park, United States of America.
Ezequiel M MarzinelliEcology and Environment Research Centre, The University of Sydney, Sydney, Australia.
Teresa Maria MorgantiMax Planck Institute for Marine Microbiology, Bremen, Germany.
Laura Núñez PonsSection Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Napoli, Italy.
Soizic PradoMolecules of Communication and Adaptation of Microorganisms (UMR 7245), National Museum of Natural History, CNRS, Paris, France.
José PintadoInstituto de Investigaciones Marinas, CSIC, Vigo, Spain.
Mahasweta SahaBenthic Ecology, Helmholtz Center for Ocean Research, Kiel, Germany.
Marc-André SelosseNational Museum of Natural History, Département Systématique et Evolution, Paris, France.
Derek SkillingsPhilosophy Department, University of Pennsylvania, Philadelphia, United States of America.
Willem StockLaboratory of Protistology & Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium.
Shinichi SunagawaDept. of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH, Zürich, Switzerland.
Eve ToulzaIHPE, Univ. de Montpellier, CNRS, IFREMER, UPDV, Perpignan, France.
Alexey VorobevCEA - Institut de Biologie François Jacob, Genoscope, Evry, France.
Catherine LeblancIntegrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Fabrice NotAdaptation and Diversity in the Marine Environment, Station Biologique de Roscoff, Sorbonne Université, CNRS, Roscoff, France.
Station Biologique de Roscoff · FRCentre National de la Recherche Scientifique · FRIfremer · FRMuséum national d'Histoire naturelle · FRStazione Zoologica Anton Dohrn · ITCentro de Ciências do Mar do AlgarveETH Zurich · CHFriedrich Schiller University Jena · DEGenoscope · FRGEOMAR Helmholtz Centre for Ocean Research Kiel · DEGhent University · BEInstitut de Biologie Paris-Seine · FRInstitut de Recherche pour le Développement · FRInstituto de Investigacións Mariñas · ESLaboratoire des Sciences du Numérique de Nantes · FRManchester Metropolitan University · GBMax Planck Institute for Marine Microbiology · DEPennsylvania State University · USScottish Association For Marine Science · GBThe University of Sydney · AU

Funding

Core Violence and Injury Prevention Program (Core VIPP)U17CE002001 · CE · MARYLAND STATE DEPARTMENT OF HEALTH · PI LEUNG, JADE · 2011 to 2015
$1.5M
NCIPC CDC HHS U17 CE002001
6 · The paper itself

Abstract

Host-microbe interactions play crucial roles in marine ecosystems. However, we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help to describe and understand these complex systems. It posits that a host and its associated microbiota with which it interacts, form a holobiont, and have to be studied together as a coherent biological and functional unit to understand its biology, ecology, and evolution. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We highlight the potential economic, sociological, and environmental impacts of the holobiont concept in marine biological, evolutionary, and environmental sciences. Given the connectivity and the unexplored biodiversity specific to marine ecosystems, a deeper understanding of such complex systems requires further technological and conceptual advances, e.g., the development of controlled experimental model systems for holobionts from all major lineages and the modeling of (info)chemical-mediated interactions between organisms. Here we propose that one significant challenge is to bridge cross-disciplinary research on tractable model systems in order to address key ecological and evolutionary questions. This first step is crucial to decipher the main drivers of the dynamics and evolution of holobionts and to account for the holobiont concept in applied areas, such as the conservation, management, and exploitation of marine ecosystems and resources, where practical solutions to predict and mitigate the impact of human activities are more important than ever.

Indexed as

DysbiosisEcosystem servicesEvolutionHost-microbiota interactionsMarine holobiontsSymbiosis

Identifiers

PMID33665032
PMCPMC7916533
OpenAlexW3129985948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.