Evidence map›Paper›PMID 33664499›Full record

ArticleEuropean journal of human genetics : EJHG2021

Colocalization analysis of polycystic ovary syndrome to identify potential disease-mediating genes and proteins.

Jenny C Censin, Jonas Bovijn, Michael V Holmes, Cecilia M Lindgren

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it, 22 citations in OpenAlex.

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  8. Brain-Specific Gata4 Downregulation in Greywick Female Mice Models the Metabolic Subtype of Polycystic Ovary Syndrome.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Jenny C CensinBig Data Institute at the Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK. jenny.censin@ndm.ox.ac.uk.ORCID 0000-0001-6625-6074
Jonas BovijnBig Data Institute at the Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK.
Michael V HolmesNIHR Oxford Biomedical Research Centre, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK.ORCID 0000-0001-6617-0879
Cecilia M LindgrenBig Data Institute at the Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK.
Centre for Human Genetics · GBBroad Institute · USJohn Radcliffe Hospital · GB

Funding

The Genetic Determinants of Human GNRH DeficiencyP50HD028138 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI SEMINARA, STEPHANIE BETH · 2014 to 2020
$12.9M
British Heart Foundation FS/18/23/33512British Heart Foundation RG/17/1/32663Department of HealthMedical Research CouncilNICHD NIH HHS P50 HD028138Wellcome TrustWellcome Trust 203141/Z/16/Z
6 · The paper itself

Abstract

Polycystic ovary syndrome (PCOS) is a common complex disease in women with a strong genetic component and downstream consequences for reproductive, metabolic and psychological health. There are currently 19 known PCOS risk loci, primarily identified in women of Han Chinese or European ancestry, and 14 of these risk loci were identified or replicated in a genome-wide association study of PCOS performed in up to 10,074 cases and 103,164 controls of European descent. However, for most of these loci the gene responsible for the association is unknown. We therefore use a Bayesian colocalization approach (Coloc) to highlight genes in PCOS-associated regions that may have a role in mediating the disease risk. We evaluated the posterior probabilities of evidence consistent with shared causal variants between 14 PCOS genetic risk loci and intermediate cellular phenotypes in one protein (N = 3301) and two expression quantitative trait locus datasets (N = 31,684 and N = 80-491). Through these analyses, we identified seven proteins or genes with evidence of a possibly shared causal variant for almost 30% of known PCOS signals, including follicle stimulating hormone and ERBB3, IKZF4, RPS26, SUOX, ZFP36L2, and C8orf49. Several of these potential effector proteins and genes have been implicated in the hypothalamic-pituitary-gonadal signalling pathway and provide an avenue for functional follow-up in order to demonstrate a causal role in PCOS pathophysiology.

Indexed as

Quantitative Trait LociFemaleHumansIkaros Transcription FactorOxidoreductases Acting on Sulfur Group DonorsPolycystic Ovary SyndromeProteomeReceptor, ErbB-3Ribosomal ProteinsTranscription FactorsERBB3 protein, humanIkaros Transcription FactorIKZF4 protein, humanOxidoreductases Acting on Sulfur Group DonorsProteomeReceptor, ErbB-3Ribosomal ProteinsRPS26 protein, humanSUOX protein, humanTranscription FactorsZFP36L2 protein, human

Identifiers

PMID33664499
PMCPMC8440598
OpenAlexW3135227896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.