Evidence map›Paper›PMID 33664297›Full record

ArticleScientific reports2021

Elucidating the genetics of grain yield and stress-resilience in bread wheat using a large-scale genome-wide association mapping study with 55,568 lines.

Philomin Juliana, Ravi Prakash Singh, Jesse Poland, Sandesh Shrestha, Julio Huerta-Espino, Velu Govindan, Suchismita Mondal, Leonardo Abdiel Crespo-Herrera, Uttam Kumar, Arun Kumar Joshi and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  6. Drought-tolerant wheat for enhancing global food security.Functional & integrative genomics · 2024
    Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Philomin JulianaInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Ravi Prakash SinghInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico. r.singh@cgiar.org.
Jesse PolandDepartment of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, USA.
Sandesh ShresthaDepartment of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, USA.
Julio Huerta-EspinoCampo Experimental Valle de Mexico, Instituto Nacional de Investigaciones Forestales, Agricolas Y Pecuarias (INIFAP), Chapingo, Mexico.
Velu GovindanInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Suchismita MondalInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Leonardo Abdiel Crespo-HerreraInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Uttam KumarCIMMYT, NASC Complex, New Delhi, India.
Arun Kumar JoshiCIMMYT, NASC Complex, New Delhi, India.
Thomas PayneInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Pradeep Kumar BhatiCIMMYT, NASC Complex, New Delhi, India.
Vipin TomarBorlaug Institute for South Asia (BISA), New Delhi, India.
Franjel ConsolacionInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Jaime Amador Campos SernaInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wheat grain yield (GY) improvement using genomic tools is important for achieving yield breakthroughs. To dissect the genetic architecture of wheat GY potential and stress-resilience, we have designed this large-scale genome-wide association study using 100 datasets, comprising 105,000 GY observations from 55,568 wheat lines evaluated between 2003 and 2019 by the International Maize and Wheat Improvement Center and national partners. We report 801 GY-associated genotyping-by-sequencing markers significant in more than one dataset and the highest number of them were on chromosomes 2A, 6B, 6A, 5B, 1B and 7B. We then used the linkage disequilibrium (LD) between the consistently significant markers to designate 214 GY-associated LD-blocks and observed that 84.5% of the 58 GY-associated LD-blocks in severe-drought, 100% of the 48 GY-associated LD-blocks in early-heat and 85.9% of the 71 GY-associated LD-blocks in late-heat, overlapped with the GY-associated LD-blocks in the irrigated-bed planting environment, substantiating that simultaneous improvement for GY potential and stress-resilience is feasible. Furthermore, we generated the GY-associated marker profiles and analyzed the GY favorable allele frequencies for a large panel of 73,142 wheat lines, resulting in 44.5 million datapoints. Overall, the extensive resources presented in this study provide great opportunities to accelerate breeding for high-yielding and stress-resilient wheat varieties.

Indexed as

Genome-Wide Association StudyAllelesBreadChromosome MappingDroughtsEdible GrainGenetic LinkageGenome, PlantGenotypeLinkage DisequilibriumPhenotypePlant BreedingPolymorphism, Single NucleotideQuantitative Trait LociTriticum

Identifiers

PMID33664297
PMCPMC7933281

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.