Evidence map›Paper›PMID 33663380›Full record

ArticleBMC genomics2021

Comparative analysis of drought-responsive and -adaptive genes in Chinese wingnut (Pterocarya stenoptera C. DC).

Yong Li, Yu-Tao Si, Yan-Xia He, Jia-Xin Li

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yong LiInnovation Platform of Molecular Biology, College of Landcape and Art, Henan Agricultural University, Zhengzhou, China. liyongrui1@126.com.
Yu-Tao SiInnovation Platform of Molecular Biology, College of Landcape and Art, Henan Agricultural University, Zhengzhou, China.
Yan-Xia HeSchool of Life Sciences, Henan University, Kaifeng, China.
Jia-Xin LiInnovation Platform of Molecular Biology, College of Landcape and Art, Henan Agricultural University, Zhengzhou, China.
Henan Agricultural University · CNHenan University · CN

Funding

Henan Agricultural University Science & Technology Innovation Fund KJCX2016A2Henan Science and Technology Project 202102110077National Natural Science Foundation of China 31770225
6 · The paper itself

Abstract

backgroundDrought is the main stress factor for the cultivation of Pterocarya stenoptera in urban areas, and this factor will cause its dehydration and affect its growth. Identifying drought-related genes will be useful for understanding the drought adaptation mechanism of P. stenoptera.

resultsWe used physiological indicator detection, comparative transcriptome sequencing, and reanalysis on the results of previous landscape genomics studies to investigate the drought adaptation mechanism in P. stenoptera. The changes in malondialdehyde content showed that P. stenoptera was remarkably affected by drought stress, and the increase in soluble sugar content suggested its important role in response to drought stress. Results of comparative transcriptome sequencing showed that P. stenoptera initiated a series of programs, such as increasing the gene expression of unsaturated fatty acids, tyrosine, and plant pathogen resistance, to deal with the transient drought stress. According to the annotated results in a previous study, P. stenoptera adapts to the long-term differential drought stress by regulating the thickness of cell walls and expressing upper or lower limits of the downstream genes in the hormone signaling pathway. Through the comparative analysis of drought-responsive and -adaptive genes in P. stenoptera, this study supports the hypothesis that the environment-responsive genes (ERGs) introduced by the transient environmental stresses will be substantially more than the environment-adaptive genes (EAGs) in response to long-term differential environmental stresses, and the EAGs are not necessarily ERGs.

conclusionsOur study identified drought-responsive and -adaptive genes in P. stenoptera and revealed that P. stenoptera increased the gene expression of unsaturated fatty acids, tyrosine, and plant pathogen resistance in response to transient drought stress. This study reveals the different adaptation mechanism of P. stenoptera under the transient and long-term differential drought stresses.

Indexed as

DroughtsGene Expression ProfilingAdaptation, PhysiologicalChinaGene Expression Regulation, PlantStress, PhysiologicalTranscriptomeDrought-adaptive geneDrought-responsive geneDrought stressPterocarya stenopteraTranscriptome

Identifiers

PMID33663380
PMCPMC7934232
OpenAlexW3134842380

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.