Evidence map›Paper›PMID 33661998›Full record

ArticlePloS one2021

Genome editing to model and reverse a prevalent mutation associated with myeloproliferative neoplasms.

Ron Baik, Stacia K Wyman, Shaheen Kabir, Jacob E Corn

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ron BaikInnovative Genomics Institute, University of California, Berkeley, CA, United States of America.
Stacia K WymanInnovative Genomics Institute, University of California, Berkeley, CA, United States of America.
Shaheen KabirInnovative Genomics Institute, University of California, Berkeley, CA, United States of America.
Jacob E CornInnovative Genomics Institute, University of California, Berkeley, CA, United States of America.ORCID 0000-0002-2458-0121
Innovative Genomics Institute · USUniversity of California, San Francisco · US

Funding

Discovering mechanisms that regulate organelle autophagyDP2HL141006 · NHLBI · UNIVERSITY OF CALIFORNIA BERKELEY · PI CORN, JACOB ELLERY · 2017 to 2017
$2.4M
NHLBI NIH HHS DP2 HL141006
6 · The paper itself

Abstract

Myeloproliferative neoplasms (MPNs) cause the over-production of blood cells such as erythrocytes (polycythemia vera) or platelets (essential thrombocytosis). JAK2 V617F is the most prevalent somatic mutation in many MPNs, but previous modeling of this mutation in mice relied on transgenic overexpression and resulted in diverse phenotypes that were in some cases attributed to expression level. CRISPR-Cas9 engineering offers new possibilities to model and potentially cure genetically encoded disorders via precise modification of the endogenous locus in primary cells. Here we develop "scarless" Cas9-based reagents to create and reverse the JAK2 V617F mutation in an immortalized human erythroid progenitor cell line (HUDEP-2), CD34+ adult human hematopoietic stem and progenitor cells (HSPCs), and immunophenotypic long-term hematopoietic stem cells (LT-HSCs). We find no overt in vitro increase in proliferation associated with an endogenous JAK2 V617F allele, but co-culture with wild type cells unmasks a competitive growth advantage provided by the mutation. Acquisition of the V617F allele also promotes terminal differentiation of erythroid progenitors, even in the absence of hematopoietic cytokine signaling. Taken together, these data are consistent with the gradually progressive manifestation of MPNs and reveals that endogenously acquired JAK2 V617F mutations may yield more subtle phenotypes as compared to transgenic overexpression models.

Indexed as

Gene EditingCell LineCoculture TechniquesCRISPR-Cas SystemsErythroid Precursor CellsHematopoietic Stem CellsHumansJanus Kinase 2Myeloproliferative DisordersJanus Kinase 2

Identifiers

PMID33661998
PMCPMC7932127
OpenAlexW3134567435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.