Evidence map›Paper›PMID 33658518›Full record

ArticleNature communications2021

Inter- and intra-tumor heterogeneity of metastatic prostate cancer determined by digital spatial gene expression profiling.

Lauren Brady, Michelle Kriner, Ilsa Coleman, Colm Morrissey, Martine Roudier, Lawrence D True, Roman Gulati, Stephen R Plymate, Zoey Zhou, Brian Birditt and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 167 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
167citing papers in PubMed, 8 pooled it
35.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

167 citing papers in PubMed, 8 syntheses or guidelines pooled it, 293 citations in OpenAlex.

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  15. Evaluation of Tissue from Patients with Prostate Cancer Identifies B7-H3 as an Androgen-Regulated, Broadly Expressed, Combinatorial Therapeutic Target.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  16. Advances in spatial omics for the analysis of prostate cancer.Analytical and bioanalytical chemistry · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. Review

107 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Lauren Brady *Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-7876-5164
Michelle Kriner *NanoString Technologies, Inc., Seattle, WA, USA.
Ilsa ColemanFred Hutchinson Cancer Research Center, Seattle, WA, USA.
Colm MorrisseyUniversity of Washington, Seattle, WA, USA.
Martine RoudierUniversity of Washington, Seattle, WA, USA.
Lawrence D TrueUniversity of Washington, Seattle, WA, USA.
Roman GulatiFred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-7592-6567
Stephen R PlymateUniversity of Washington, Seattle, WA, USA.
Zoey ZhouNanoString Technologies, Inc., Seattle, WA, USA.
Brian BirdittNanoString Technologies, Inc., Seattle, WA, USA.
Rhonda MeredithNanoString Technologies, Inc., Seattle, WA, USA.
Gary GeissNanoString Technologies, Inc., Seattle, WA, USA.
Margaret HoangNanoString Technologies, Inc., Seattle, WA, USA.
Joseph BeechemNanoString Technologies, Inc., Seattle, WA, USA.
Peter S NelsonFred Hutchinson Cancer Research Center, Seattle, WA, USA. pnelson@fredhutch.org.ORCID 0000-0002-5451-5726
Nanostring Technologies (United States) · USUniversity of Washington · USFred Hutch Cancer Center · USCape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZA

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI PETER S NELSON · 2002 to 2026
$58.1M
Steroid Metabolism in Castration-Resistant Prostate CancerP01CA163227 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI PETER S NELSON · 2013 to 2026
$25.0M
The MSKCC-UW/Fred Hutch Prostate Cancer Drug Resistance and Sensitivity CenterU54CA224079 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI SAWYERS, CHARLES L. · 2017 to 2021
$6.8M
Defining and Targeting Lineage Transition Programs Operative in AR Pathway Independent Prostate CancerR01CA234715 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NELSON, PETER S · 2020 to 2024
$2.0M
High-Performance Compute Cluster for Comprehensive Cancer and Infectious Diseases ResearchS10OD028685 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BRADLEY, PHILIP · 2020 to 2020
$2.0M
Statistical modeling to support population and translational cancer researchR50CA221836 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Roman Gulati · 2017 to 2026
$2.0M
NCI NIH HHS P01 CA163227NCI NIH HHS P30 CA015704NCI NIH HHS P50 CA097186NCI NIH HHS R01 CA234715NCI NIH HHS R50 CA221836NCI NIH HHS U54 CA224079NIH HHS S10 OD028685
6 · The paper itself

Abstract

Metastatic prostate cancer (mPC) comprises a spectrum of diverse phenotypes. However, the extent of inter- and intra-tumor heterogeneity is not established. Here we use digital spatial profiling (DSP) technology to quantitate transcript and protein abundance in spatially-distinct regions of mPCs. By assessing multiple discrete areas across multiple metastases, we find a high level of intra-patient homogeneity with respect to tumor phenotype. However, there are notable exceptions including tumors comprised of regions with high and low androgen receptor (AR) and neuroendocrine activity. While the vast majority of metastases examined are devoid of significant inflammatory infiltrates and lack PD1, PD-L1 and CTLA4, the B7-H3/CD276 immune checkpoint protein is highly expressed, particularly in mPCs with high AR activity. Our results demonstrate the utility of DSP for accurately classifying tumor phenotype, assessing tumor heterogeneity, and identifying aspects of tumor biology involving the immunological composition of metastases.

Indexed as

B7 AntigensB7-H1 AntigenCTLA-4 AntigenGene Expression ProfilingGene Expression Regulation, NeoplasticHepatitis A Virus Cellular Receptor 2HumansMaleParaffin EmbeddingPhenotypeProgrammed Cell Death 1 ReceptorProstatic NeoplasmsReceptors, AndrogenTissue Array AnalysisTranscriptomeAR protein, humanB7 AntigensB7-H1 AntigenCD274 protein, humanCD276 protein, humanCTLA-4 AntigenCTLA4 protein, humanHAVCR2 protein, humanHepatitis A Virus Cellular Receptor 2PDCD1 protein, humanProgrammed Cell Death 1 ReceptorReceptors, Androgen

Identifiers

PMID33658518
PMCPMC7930198
OpenAlexW3134382826

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.