Evidence map›Paper›PMID 33658363›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Sialoglycan recognition is a common connection linking acidosis, zinc, and HMGB1 in sepsis.

Shoib S Siddiqui, Chirag Dhar, Venkatasubramaniam Sundaramurthy, Aniruddha Sasmal, Hai Yu, Esther Bandala-Sanchez, Miaomiao Li, Xiaoxiao Zhang, Xi Chen, Leonard C Harrison and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Histone lactylation: from tumor lactate metabolism to epigenetic regulation.International journal of biological sciences · 2024
    Review
  4. InducedFrontiers in microbiology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Shoib S SiddiquiDepartment of Medicine, University of California San Diego, La Jolla, CA 92093.
Chirag DharDepartment of Medicine, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0002-7351-485X
Venkatasubramaniam SundaramurthyDepartment of Medicine, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0002-9245-1604
Aniruddha SasmalDepartment of Medicine, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0001-5446-8192
Hai YuDepartment of Chemistry, University of California, Davis, CA 95616.ORCID 0000-0002-4378-0532
Esther Bandala-SanchezThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC 3052, Australia.ORCID 0000-0003-3875-8872
Miaomiao LiDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, Buffalo, NY 14214.ORCID 0000-0003-4508-196X
Xiaoxiao ZhangDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, Buffalo, NY 14214.ORCID 0000-0003-1321-0798
Xi ChenDepartment of Chemistry, University of California, Davis, CA 95616.ORCID 0000-0002-3160-614X
Leonard C HarrisonThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC 3052, Australia.ORCID 0000-0002-2500-8944
Ding XuDepartment of Oral Biology, School of Dental Medicine, University at Buffalo, The State University of New York, Buffalo, NY 14214.ORCID 0000-0001-9380-2712
Ajit VarkiDepartment of Medicine, University of California San Diego, La Jolla, CA 92093; a1varki@ucsd.edu.ORCID 0000-0002-2206-975X
University of California San Diego · USUniversity at Buffalo, State University of New York · USThe University of Melbourne · AUUniversity of California, Davis · US

Funding

BIOSYNTHESIS AND REGULATION OF SUBSTITUTED SIALIC ACIDSR01GM032373 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VARKI, AJIT P · 1985 to 2022
$6.9M
In vitro synthesis of recombinant heparan sulfateR01HL094463 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, JIAN, PAWLINSKI, RAFAL L · 2009 to 2021
$5.2M
Heparan Sulfate–Osteoprotegerin Interactions in Bone RemodelingR01AR070179 · NIAMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI XU, DING · 2017 to 2021
$1.7M
NHLBI NIH HHS R01 HL094463NIAMS NIH HHS R01 AR070179NIGMS NIH HHS R01 GM032373
6 · The paper itself

Abstract

Blood pH is tightly maintained between 7.35 and 7.45, and acidosis (pH <7.3) indicates poor prognosis in sepsis, wherein lactic acid from anoxic tissues overwhelms the buffering capacity of blood. Poor sepsis prognosis is also associated with low zinc levels and the release of High mobility group box 1 (HMGB1) from activated and/or necrotic cells. HMGB1 added to whole blood at physiological pH did not bind leukocyte receptors, but lowering pH with lactic acid to mimic sepsis conditions allowed binding, implying the presence of natural inhibitor(s) preventing binding at normal pH. Testing micromolar concentrations of divalent cations showed that zinc supported the robust binding of sialylated glycoproteins with HMGB1. Further characterizing HMGB1 as a sialic acid-binding lectin, we found that optimal binding takes place at normal blood pH and is markedly reduced when pH is adjusted with lactic acid to levels found in sepsis. Glycan array studies confirmed the binding of HMGB1 to sialylated glycan sequences typically found on plasma glycoproteins, with binding again being dependent on zinc and normal blood pH. Thus, HMGB1-mediated hyperactivation of innate immunity in sepsis requires acidosis, and micromolar zinc concentrations are protective. We suggest that the potent inflammatory effects of HMGB1 are kept in check via sequestration by plasma sialoglycoproteins at physiological pH and triggered when pH and zinc levels fall in late stages of sepsis. Current clinical trials independently studying zinc supplementation, HMGB1 inhibition, or pH normalization may be more successful if these approaches are combined and perhaps supplemented by infusions of heavily sialylated molecules.

Indexed as

AcidosisCarrier ProteinsHMGB1 ProteinHumansHydrogen-Ion ConcentrationImmunity, InnateLipopolysaccharidesPolysaccharidesSepsisSialic AcidsSialoglycoproteinsZincCarrier ProteinsHMGB1 ProteinLipopolysaccharidesPolysaccharidesSialic AcidsSialoglycoproteinsZincCOVID-19cytokine stormHMGB1Neu5Acsialic acid

Identifiers

PMID33658363
PMCPMC7958265
OpenAlexW3134493801

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.