Evidence map›Paper›PMID 33658340›Full record

ArticleJournal of virology2021

People with HIV-1 demonstrate type 1 interferon refractoriness associated with upregulated USP18.

Sho Sugawara, Ramy El-Diwany, Laura K Cohen, Kimberly E Rousseau, Christopher Y K Williams, Rebecca T Veenhuis, Shruti H Mehta, Joel N Blankson, David L Thomas, Andrea L Cox and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. The STAT Signaling Pathway in HIV-1 Infection: Roles and Dysregulation.International journal of molecular sciences · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Sho SugawaraDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.ORCID https://orcid.org/0000-0002-5187-423X
Ramy El-DiwanyDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Laura K CohenDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Kimberly E RousseauDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Christopher Y K WilliamsUniversity of Cambridge School of Clinical Medicine, Cambridge CB2 0SP, United Kingdom.
Rebecca T VeenhuisDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Shruti H MehtaDepartment of Epidemiology, Johns Hopkins University School of Public Health, Baltimore, Maryland, USA.
Joel N BlanksonDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
David L ThomasDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Andrea L CoxDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Ashwin BalagopalDepartment of Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA abalago1@jhmi.edu.ORCID https://orcid.org/0000-0002-6143-3104
Johns Hopkins University · USBeth Israel Deaconess Medical Center · USUniversity of Cambridge · GB

Funding

Vaccine Response and Immunotherapeutics SWGP30AI094189 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Anna Palmer Durbin · 2012 to 2026
$67.0M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007309 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 1985 to 2019
$43.2M
The AIDS Linked to the Intravenous Experience (ALIVE) StudyU01DA036297 · NIDA · JOHNS HOPKINS UNIVERSITY · PI Gregory D Kirk, Shruti H Mehta · 2014 to 2026
$28.9M
The Progression of Hepatitis C Among IDUs with HIVR01DA016078 · NIDA · JOHNS HOPKINS UNIVERSITY · PI BALAGOPAL, ASHWIN, THOMAS, DAVID L · 2002 to 2016
$10.9M
The Impact of HCV Treatment in HIV/HCV coinfected and HCV monoinfected Incarcerated Persons on HCV EliminationR01DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI IRVIN, RISHA, THOMAS, DAVID L · 2000 to 2024
$8.7M
Spatial Models of Intrahepatic Hepatitis C Virus Propagation in HumansR01AI116868 · NIAID · TRIAD NATIONAL SECURITY, LLC · PI ASHWIN BALAGOPAL, Ruy M Ribeiro · 2016 to 2026
$8.5M
Scientific CoreU19AI088791 · NIAID · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 2010 to 2020
$8.2M
HIV HCV Coinfection Antiviral Therapy and FibrosisR37DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI THOMAS, DAVID L · 2010 to 2019
$7.0M
Antibody-Mediated Suppression of Antiviral Inflammasome ActivationR01AI108403 · NIAID · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 2013 to 2017
$2.2M
Optimization of high throughput viral outgrowth assays for the detection of HIV-1 reservoirsR01AI140789 · NIAID · JOHNS HOPKINS UNIVERSITY · PI BLANKSON, JOEL N · 2018 to 2021
$1.6M
NIAID NIH HHS P30 AI094189NIAID NIH HHS R01 AI108403NIAID NIH HHS R01 AI116868NIAID NIH HHS R01 AI140789NIAID NIH HHS U19 AI088791NIDA NIH HHS R01 DA013806NIDA NIH HHS R01 DA016078NIDA NIH HHS R37 DA013806NIDA NIH HHS U01 DA036297NIGMS NIH HHS T32 GM007309
6 · The paper itself

Abstract

HIV-1 infection persists in humans despite expression of antiviral type 1 interferons (IFN). Even exogenous administration of IFNα only marginally reduces HIV-1 abundance, raising the hypothesis that people living with HIV-1 (PLWH) are refractory to type 1 IFN. We demonstrated type 1 IFN refractoriness in CD4+ and CD8+ T cells isolated from HIV-1 infected persons by detecting diminished STAT1 phosphorylation (pSTAT1) and interferon-stimulated gene (ISG) induction upon type 1 IFN stimulation compared to healthy controls. Importantly, HIV-1 infected people who were virologically suppressed with antiretrovirals also showed type 1 IFN refractoriness. We found that USP18 levels were elevated in people with refractory pSTAT1 and ISG induction and confirmed this finding

Identifiers

PMID33658340
PMCPMC8139647
OpenAlexW3133654545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.