Evidence map›Paper›PMID 33656268›Full record

ArticleEMBO molecular medicine2021

Cooperation of LIM domain-binding 2 (LDB2) with EGR in the pathogenesis of schizophrenia.

Tetsuo Ohnishi, Yuji Kiyama, Fumiko Arima-Yoshida, Mitsutaka Kadota, Tomoe Ichikawa, Kazuyuki Yamada, Akiko Watanabe, Hisako Ohba, Kaori Tanaka, Akihiro Nakaya and 22 more

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 8 institutions in 1 country.

Tetsuo OhnishiLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0002-6696-9725
Yuji KiyamaDivision of Neuronal Network, Institute of Medical Science, the University of Tokyo, Tokyo, Japan.ORCID 0000-0001-5415-3473
Fumiko Arima-YoshidaDivision of Neuronal Network, Institute of Medical Science, the University of Tokyo, Tokyo, Japan.
Mitsutaka KadotaLaboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.ORCID 0000-0002-1674-6697
Tomoe IchikawaSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.
Kazuyuki YamadaSchool of Management, Shizuoka Sangyo University, Iwata, Japan.
Akiko WatanabeLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Hisako OhbaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Kaori TanakaLaboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.
Akihiro NakayaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Yasue HoriuchiSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.ORCID 0000-0003-0597-2514
Yoshimi IwayamaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Manabu ToyoshimaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0001-7291-8935
Itone OgawaDivision of Neuronal Network, Institute of Medical Science, the University of Tokyo, Tokyo, Japan.
Chie Shimamoto-MitsuyamaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0002-8524-974X
Motoko MaekawaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Shabeesh BalanLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0002-1098-1290
Makoto AraiSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.
Mitsuhiro MiyashitaSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.
Kazuya ToriumiSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.ORCID 0000-0002-8593-3269
Yayoi NozakiLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
Rumi KurokawaRIKEN, Wako, Japan.
Kazuhiro SuzukiSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.
Akane YoshikawaSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.
Tomoko ToyotaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0003-0034-309X
Toshihiko HosoyaRIKEN, Wako, Japan.ORCID 0000-0001-8559-8344
Hiroyuki OkunoLaboratory of Biochemistry and Molecular Biology, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.ORCID 0000-0001-6237-6503
Haruhiko BitoDepartment of Neurochemistry, the University of Tokyo, Graduate School of Medicine, Tokyo, Japan.ORCID 0000-0001-6315-9594
Masanari ItokawaSchizophrenia Research Project, Tokyo Metropolitan Institute of Medical Sciences, Shizuoka, Japan.ORCID 0000-0003-4433-8030
Shigehiro KurakuLaboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.ORCID 0000-0003-1464-8388
Toshiya ManabeDivision of Neuronal Network, Institute of Medical Science, the University of Tokyo, Tokyo, Japan.ORCID 0000-0002-5359-6704
Takeo YoshikawaLaboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.ORCID 0000-0003-2791-6679
RIKEN Center for Brain Science · JPTokyo Metropolitan Matsuzawa Hospital · JPWako University · JPRIKEN Center for Biosystems Dynamics Research · JPThe University of Tokyo · JPKagoshima University · JPJikei University School of Medicine · JPMeiji Pharmaceutical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic defects with large effect size can help elucidate unknown pathologic architecture of mental disorders. We previously reported on a patient with schizophrenia and a balanced translocation between chromosomes 4 and 13 and found that the breakpoint within chromosome 4 is located near the LDB2 gene. We show here that Ldb2 knockout (KO) mice displayed multiple deficits relevant to mental disorders. In particular, Ldb2 KO mice exhibited deficits in the fear-conditioning paradigm. Analysis of the amygdala suggested that dysregulation of synaptic activities controlled by the immediate early gene Arc is involved in the phenotypes. We show that LDB2 forms protein complexes with known transcription factors. Consistently, ChIP-seq analyses indicated that LDB2 binds to > 10,000 genomic sites in human neurospheres. We found that many of those sites, including the promoter region of ARC, are occupied by EGR transcription factors. Our previous study showed an association of the EGR family genes with schizophrenia. Collectively, the findings suggest that dysregulation in the gene expression controlled by the LDB2-EGR axis underlies a pathogenesis of subset of mental disorders.

Indexed as

SchizophreniaAnimalsFearGene ExpressionHumansLIM Domain ProteinsMiceMice, KnockoutTranscription FactorsLDB2 protein, humanLdb2 protein, mouseLIM Domain ProteinsTranscription Factorsamygdalabalanced chromosomal translocationbehaviorChIP-seqknockout mouse

Identifiers

PMID33656268
PMCPMC8033514
OpenAlexW3135842762

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.