Evidence map›Paper›PMID 33654130›Full record

Observational studyScientific reports2021

Altered metabolic and inflammatory transcriptomics after cardiac surgery in neonates with congenital heart disease.

Parag N Jain, Matthew Robertson, Javier J Lasa, Lara Shekerdemian, Danielle Guffey, Yuhao Zhang, Krithika Lingappan, Paul Checchia, Cristian Coarfa

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Parag N Jain *Baylor College of Medicine and Texas Children's Hospital, Houston, TX, USA. pnjain@texaschildrens.org.
Matthew Robertson *Baylor College of Medicine, Houston, TX, USA.
Javier J LasaBaylor College of Medicine and Texas Children's Hospital, Houston, TX, USA.
Lara ShekerdemianBaylor College of Medicine and Texas Children's Hospital, Houston, TX, USA.
Danielle GuffeyBaylor College of Medicine, Houston, TX, USA.
Yuhao ZhangBaylor College of Medicine, Houston, TX, USA.
Krithika LingappanBaylor College of Medicine and Texas Children's Hospital, Houston, TX, USA.
Paul ChecchiaBaylor College of Medicine and Texas Children's Hospital, Houston, TX, USA.
Cristian CoarfaBaylor College of Medicine, Houston, TX, USA. coarfa@bcm.edu.
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Translational Research Support CoreP30ES030285 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Casey W Wright · 2019 to 2026
$14.7M
Mechanisms of sex differences in neonatal pulmonary oxygen toxicityR01HL144775 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI LINGAPPAN, KRITHIKA · 2019 to 2023
$2.7M
AICORE-kids: Artificial Intelligence COVID-19 Risk AssEssment for kidsR61HD105593 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI ALLEN, CARL E, ANNAPRAGADA, ANANTH V · 2021 to 2022
$1.6M
Mechanisms of sex specific differences in neonatal hyperoxic lung injuryK08HL127103 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LINGAPPAN, KRITHIKA · 2015 to 2019
$816k
Sex-specific differences in neonatal hyperoxic lung injury: Role of the NF-kappa B pathwayR03HL141572 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LINGAPPAN, KRITHIKA · 2018 to 2019
$159k
NCI NIH HHS P30 CA125123NHLBI NIH HHS K08 HL127103NHLBI NIH HHS R01 HL144775NHLBI NIH HHS R03 HL141572NICHD NIH HHS R61 HD105593NIEHS NIH HHS P30 ES030285NIH HHS R61HD105593
6 · The paper itself

Abstract

The study examines the whole blood transcriptome profile before and after cardiopulmonary bypass (CPB) in neonates with hypoplastic left heart syndrome (HLHS), a severe form of congenital heart disease, that can develop low cardiac output syndrome (LCOS). Whole blood mRNA transcriptome profiles of 13 neonates with HLHS before and after their first palliative surgery were analyzed to determine differentially expressed genes and pathways. The median age and weight at surgery were 4 days and 3.2 kg, respectively. Of the 13 patients, 8 developed LCOS. There was no significant difference between CPB, aortic cross clamp, deep hypothermic cardiac arrest times between patients that develop LCOS and those that do not. Upon comparing differential gene expression profiles between patients that develop LCOS and those that do not in pre-operative samples, 1 gene was up-regulated and 13 were down regulated. In the post-operative samples, 4 genes were up-regulated, and 4 genes were down regulated when patients that develop LCOS were compared to those that do not. When comparing post-operative samples to pre-operative samples in the patients that do not develop LCOS, 1484 genes were up-regulated, and 1388 genes were down regulated; while patients that developed LCOS had 2423 up-regulated genes, and 2414 down regulated genes for the same pre to post-operative comparison. Pathway analysis revealed differential regulation of inflammatory pathways (IL signaling, PDGF, NOTCH1, NGF, GPCR) and metabolic pathways (heme metabolism, oxidative phosphorylation, protein metabolism including amino acid and derivatives, fatty acid metabolism, TCA cycle and respiratory electron transport chain). By identifying altered transcriptome profiles related to inflammation and metabolism in neonates with HLHS who develop LCOS after CPB, this study opens for exploration novel pathways and potential therapeutic targets to improve outcomes in this high-risk population.

Indexed as

Cardiac Surgical ProceduresCardiopulmonary BypassMetabolomeTranscriptomeFemaleHumansHypoplastic Left Heart SyndromeInfant, NewbornMaleProspective Studies

Identifiers

PMID33654130
PMCPMC7925649
OpenAlexW3135508386

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.