Evidence map›Paper›PMID 33651876›Full record

ArticleGenetics and molecular biology2021

Extreme phenotypes approach to investigate host genetics and COVID-19 outcomes.

Michel Satya Naslavsky, Mateus Vidigal, Larissa do Rêgo Barros Matos, Vivian Romanholi Cória, Pedro Benedito Batista Junior, Álvaro Razuk, Paulo Hilário Nascimento Saldiva, Marisa Dolhnikoff, Laire Schidlowski, Carolina Prando and 4 more

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Coronavirus Host Genomics Study: South Africa (COVIGen-SA).Global health, epidemiology and genomics · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Michel Satya NaslavskyUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.ORCID http://orcid.org/0000-0002-9068-1713
Mateus VidigalUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.
Larissa do Rêgo Barros MatosUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.
Vivian Romanholi CóriaUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.
Pedro Benedito Batista JuniorInstituto Prevent Senior, São Paulo, SP, Brazil.
Álvaro RazukInstituto Prevent Senior, São Paulo, SP, Brazil.
Paulo Hilário Nascimento SaldivaFaculdade de Medicina da Universidade de São Paulo (FMUSP), Departamento de Patologia, São Paulo, SP, Brazil.
Marisa DolhnikoffFaculdade de Medicina da Universidade de São Paulo (FMUSP), Departamento de Patologia, São Paulo, SP, Brazil.
Laire SchidlowskiInstituto de Pesquisa Pelé Pequeno Príncipe, Faculdades Pequeno Príncipe, Hospital Pequeno Príncipe, Curitiba, PR, Brazil.
Carolina PrandoInstituto de Pesquisa Pelé Pequeno Príncipe, Faculdades Pequeno Príncipe, Hospital Pequeno Príncipe, Curitiba, PR, Brazil.
Edécio Cunha-NetoHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo, Instituto do Coração, São Paulo, SP, Brazil.
Antonio Condino-NetoUniversidade de São Paulo, Instituto de Ciências Biomédicas, Laboratório de Imunologia Humana, São Paulo, Brazil.
Maria Rita Passos-BuenoUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.
Mayana ZatzUniversidade de São Paulo, Instituto de Biociências, Departamento de Genética e Biologia Evolutiva, Centro de Pesquisa sobre o Genoma Humano e Células-Tronco, São Paulo, SP, Brazil.
Instituto Biológico · BRHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRHospital Erasto Gaertner · BRInstituto Vita · BRUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

COVID-19 comprises clinical outcomes of SARS-CoV-2 infection and is highly heterogeneous, ranging from asymptomatic individuals to deceased young adults without comorbidities. There is growing evidence that host genetics play an important role in COVID-19 severity, including inborn errors of immunity, age-related inflammation and immunosenescence. Here we present a brief review on the known order of events from infection to severe system-wide disturbance due to COVID-19 and summarize potential candidate genes and pathways. Finally, we propose a strategy of subject's ascertainment based on phenotypic extremes to take part in genomic studies and elucidate intrinsic risk factors involved in COVID-19 severe outcomes.

Identifiers

PMID33651876
PMCPMC7924362
OpenAlexW3134321453

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.