Evidence map›Paper›PMID 33650275›Full record

ArticleMolecular plant pathology2021

An ERF121 transcription factor from Brassica oleracea is a target for the conserved TAL-effectors from different Xanthomonas campestris pv. campestris strains.

Nikolay Zlobin, Marina Lebedeva, Yuliya Monakhova, Vera Ustinova, Vasiliy Taranov

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Pathogens (Basel, Switzerland) · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Whole-Genome Sequencing and Analysis of Tumour-Forming Radish (International journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Action Mechanisms of Effectors in Plant-Pathogen Interaction.International journal of molecular sciences · 2022
    Review
  12. Plant Executor Genes.International journal of molecular sciences · 2022
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Nikolay ZlobinLaboratory of Plant Stress Tolerance, All-Russia Research Institute of Agricultural Biotechnology, Moscow, Russia.ORCID 0000-0002-5090-6359
Marina LebedevaLaboratory of Plant Stress Tolerance, All-Russia Research Institute of Agricultural Biotechnology, Moscow, Russia.ORCID 0000-0001-5711-8331
Yuliya MonakhovaLaboratory of Synthesis and Analysis of Bioorganic Compounds, All-Russia Research Institute of Agricultural Biotechnology, Moscow, Russia.ORCID 0000-0002-6772-6098
Vera UstinovaPushchino Scientific Center for Biological Research of the Russian Academy of Sciences, G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms of the Russian Academy of Sciences, Pushchino, Russia.ORCID 0000-0002-5178-8489
Vasiliy TaranovLaboratory of Plant Stress Tolerance, All-Russia Research Institute of Agricultural Biotechnology, Moscow, Russia.ORCID 0000-0002-0728-0346
All-Russian Scientific Research Institute of Food Biotechnology · RUInstitute of Organic Synthesis · RUMoscow University «Synergy» · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription activator-like effectors (TALEs), which induce the expression of specific plant genes to promote infection, are the main pathogenic determinants of various Xanthomonas bacteria. However, investigation of TALEs from Xanthomonas campestris pv. campestris, which causes black rot disease of crucifers, received little attention. In this study, we used PCR-based amplification followed by SMRT amplicon sequencing to identify TALE genes in several X. campestris pv. campestris strains. Computational prediction in conjunction with quantitative reverse transcription PCR analysis was used to find their targets in the Brassica oleracea genome. Transcription factor ERF121, from the AP2/ERF family, was identified as target gene for the conserved TALEs from multiple X. campestris pv. campestris strains. Several members of this family from diverse plants were previously identified as targets of TALEs from different Xanthomonas species. We propose that TALE-dependent activation of AP2/ERF transcription factors promotes susceptibility to Xanthomonas through the misregulation of plant defence pathways.

Indexed as

BrassicaPlant DiseasesPlant ImmunityTranscription Activator-Like EffectorsTranscription FactorsXanthomonas campestrisTranscription Activator-Like EffectorsTranscription Factorsblack rot of cruciferssusceptibility genesusceptibility hubtranscription activator-like effectorXanthomonas campestris pv. campestris

Identifiers

PMID33650275
PMCPMC8035633
OpenAlexW3134207726

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.