Evidence map›Paper›PMID 33649954›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Identification of Bifidobacteria by the Phosphoketolase Assay.

Monica Modesto, Alice Checcucci, Paola Mattarelli

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. High-throughput single-cell isolation ofMicrobiology spectrum · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Monica ModestoDepartment of Agricultural and Food Sciences, University of Bologna, Bologna, Italy.
Alice CheccucciDepartment of Agricultural and Food Sciences, University of Bologna, Bologna, Italy.
Paola MattarelliDepartment of Agricultural and Food Sciences, University of Bologna, Bologna, Italy. paola.mattarelli@unibo.it.
University of Bologna · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bifidobacteria are commensal bacteria, which naturally colonize the gastrointestinal tract of a large number of animals, including humans, contributing to their health and well-being. An important taxonomic marker for the identification of members of the bifidobacterial group is the presence of the fructose-6-phosphate phosphoketolase (F6PPK) activity. The F6PPK enzyme is involved in the bifidus shunt based on the ability of F6PPK to split fructose-6-phosphate into erythrose-4-phosphate and acetyl phosphate. Here, we describe the two main methods utilized to detect the presence of F6PPK activity, that is, the enzymatic assay and the presence of the D-xylulose-5-phosphate/fructose-6-phosphate phosphoketolase bifidobacterial gene.

Indexed as

Aldehyde-LyasesBacterial ProteinsBacterial Typing TechniquesBifidobacteriumCell Culture TechniquesEnzyme AssaysGenes, BacterialPolymerase Chain ReactionAldehyde-LyasesBacterial Proteinsfructose-6-phosphate phosphoketolaseBacterial taxonomyBifidobacteriumBifidus shuntFructose 6 phosphoketolasePolymerase chain reaction

Identifiers

PMID33649954
OpenAlexW3134795934

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.