Evidence map›Paper›PMID 33649477›Full record

ArticleNature cell biology2021

Single-cell analyses reveal the clonal and molecular aetiology of Flt3L-induced emergency dendritic cell development.

Dawn S Lin, Luyi Tian, Sara Tomei, Daniela Amann-Zalcenstein, Tracey M Baldwin, Tom S Weber, Jaring Schreuder, Olivia J Stonehouse, Jai Rautela, Nicholas D Huntington and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Oncolytic virus-induced IL-1βJournal for immunotherapy of cancer · 2025
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  7. Review
  8. Review
  9. Article
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  11. Article
  12. CNS Resident Innate Immune Cells: Guardians of CNS Homeostasis.International journal of molecular sciences · 2024
    Review
  13. Article
  14. Article
  15. Review
  16. Guidelines for mouse and human DC generation.European journal of immunology · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Ly6DNature communications · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Dawn S LinImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-7872-6931
Luyi TianImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0003-3420-3685
Sara TomeiImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-7832-5807
Daniela Amann-ZalcensteinImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0003-4928-1846
Tracey M BaldwinSingle Cell Open Research Endeavour (SCORE), Walter and Eliza Hall Institute, Parkville, VIC, Australia.
Tom S WeberImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.
Jaring SchreuderImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-7579-0006
Olivia J StonehouseDepartment of Medical Biology, University of Melbourne, Parkville, VIC, Australia.
Jai RautelaBiomedicine Discovery Institute, Monash University, Clayton, VIC, Australia.
Nicholas D HuntingtonBiomedicine Discovery Institute, Monash University, Clayton, VIC, Australia.
Samir TaoudiDepartment of Medical Biology, University of Melbourne, Parkville, VIC, Australia.
Matthew E RitchieDepartment of Medical Biology, University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-7383-0609
Philip D HodgkinImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.
Ashley P NgDepartment of Medical Biology, University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-9690-0879
Stephen L NuttImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-0020-6637
Shalin H NaikImmunology Division, Walter and Eliza Hall Institute, Parkville, VIC, Australia. naik.s@wehi.edu.au.ORCID http://orcid.org/0000-0003-0299-3301
The University of Melbourne · AUAustralian Regenerative Medicine Institute · AUWalter and Eliza Hall Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regulation of haematopoietic stem and progenitor cell (HSPC) fate is crucial during homeostasis and under stress conditions. Here we examine the aetiology of the Flt3 ligand (Flt3L)-mediated increase of type 1 conventional dendritic cells (cDC1s). Using cellular barcoding we demonstrate this occurs through selective clonal expansion of HSPCs that are primed to produce cDC1s and not through activation of cDC1 fate by other HSPCs. In particular, multi/oligo-potent clones selectively amplify their cDC1 output, without compromising the production of other lineages, via a process we term tuning. We then develop Divi-Seq to simultaneously profile the division history, surface phenotype and transcriptome of individual HSPCs. We discover that Flt3L-responsive HSPCs maintain a proliferative 'early progenitor'-like state, leading to the selective expansion of multiple transitional cDC1-primed progenitor stages that are marked by Irf8 expression. These findings define the mechanistic action of Flt3L through clonal tuning, which has important implications for other models of 'emergency' haematopoiesis.

Indexed as

RNA-SeqSingle-Cell AnalysisAnimalsCell LineageCell ProliferationCells, CulturedDendritic CellsFemaleGene Expression Regulation, DevelopmentalHematopoiesisHematopoietic Stem CellsInterferon Regulatory Factor-8Interferon Regulatory FactorsMaleMembrane ProteinsMiceflt3 ligand proteinInterferon Regulatory Factor-8Interferon Regulatory FactorsMembrane Proteins

Identifiers

PMID33649477
OpenAlexW3133959227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.