ArticleScientific reports2021
A coffee berry borer (Hypothenemus hampei) genome assembly reveals a reduced chemosensory receptor gene repertoire and male-specific genome sequences.
Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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10 citing papers in PubMed, 21 citations in OpenAlex.
- Comparative genomics reveal signatures of ecological specialization in the striped ambrosia beetle Trypodendron lineatum.BMC genomics · 2026Article
- Genomic Insights Into the Evolution of Parental Care in Weevils.Genome biology and evolution · 2026Article
- Genome assembly of the southern pine beetle (Royal Society open science · 2024Article
- Genetic Variation in Jamaican Populations of the Coffee Berry Borer, Hypothenemus hampei.Genome biology and evolution · 2024Article
- Chromosome Structural Rearrangements in Invasive Haplodiploid Ambrosia Beetles Revealed by the Genomes of Euwallacea fornicatus (Eichhoff) and Euwallacea similis (Ferrari) (Coleoptera, Curculionidae, Scolytinae).Genome biology and evolution · 2024Article
- Chromosomal-level genome assembly of Hylurgus ligniperda: insights into host adaptation and environmental tolerance.BMC genomics · 2024Article
- Few chemoreceptor genes in the ambrosia beetle Trypodendron lineatum may reflect its specialized ecology.BMC genomics · 2024Article
- Chromosome-Level Genome Assembly ofInsects · 2024Article
- Genome assembly of the southern pine beetle (bioRxiv : the preprint server for biology · 2024Article
- Interacting pest control and pollination services in coffee systems.Proceedings of the National Academy of Sciences of the United States of America · 2022Article
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Authors and funding
12 authors at 7 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Coffee berry borer-CBB (Hypothenemus hampei) is a globally important economic pest of coffee (Coffea spp.). Despite current insect control methods for managing CBB, development of future control strategies requires a better understanding of its biology and interaction with its host plant. Towards this objective, we performed de novo CBB genome and transcriptome sequencing, improved CBB genome assembly and predicted 18,765 protein-encoding genes. Using genome and transcriptome data, we annotated the genes associated with chemosensation and found a reduced gene repertoire composed by 67 odorant receptors (ORs), 62 gustatory receptors (GRs), 33 ionotropic receptors (IRs) and 29 odorant-binding proteins (OBPs). In silico transcript abundance analysis of these chemosensory genes revealed expression enrichment in CBB adults compared with larva. Detection of differentially expressed chemosensory genes between males and females is likely associated with differences in host-finding behavior between sexes. Additionally, we discovered male-specific genome content and identified candidate male-specific expressed genes on these scaffolds, suggesting that a Y-like chromosome may be involved in the CBB's functional haplodiploid mechanism of sex determination.
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