Evidence map›Paper›PMID 33649298›Full record

ArticleNature communications2021

Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes.

Satoshi Ansai, Koji Mochida, Shingo Fujimoto, Daniel F Mokodongan, Bayu Kreshna Adhitya Sumarto, Kawilarang W A Masengi, Renny K Hadiaty, Atsushi J Nagano, Atsushi Toyoda, Kiyoshi Naruse and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. MedakaBase as a unified genomic resource platform for medaka fish biology.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Evolution of sex-biased genes inEcology and evolution · 2024
    Article
  10. Rapid body colouration changes inBiology letters · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Genetic basis of speciation and adaptation: from loci to causative mutations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  17. Speciation and adaptation research meets genome editing.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  18. Article
  19. Article
  20. MSPJ: Discovering potential biomarkers in small gene expression datasetsComputational and structural biotechnology journal · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Satoshi AnsaiEcological Genetics Laboratory, Department of Genomics and Evolutionary Biology, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID http://orcid.org/0000-0003-2683-0160
Koji MochidaTropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan.
Shingo FujimotoTropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan.
Daniel F MokodonganTropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan.
Bayu Kreshna Adhitya SumartoTropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan.
Kawilarang W A MasengiFaculty of Fisheries and Marine Science, Sam Ratulangi University, Manado, Indonesia.
Renny K HadiatyResearch Center for Biology, Indonesian Institute of Science (LIPI), Cibinong, Indonesia.
Atsushi J NaganoFaculty of Agriculture, Ryukoku University, Ohtsu, Shiga, Japan.ORCID http://orcid.org/0000-0001-7891-5049
Atsushi ToyodaComparative Genomics Laboratory, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID http://orcid.org/0000-0002-0728-7548
Kiyoshi NaruseLaboratory of Bioresources, National Institute for Basic Biology, Okazaki, Aichi, Japan.ORCID http://orcid.org/0000-0001-9185-3495
Kazunori YamahiraTropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, Japan.
Jun KitanoEcological Genetics Laboratory, Department of Genomics and Evolutionary Biology, National Institute of Genetics, Mishima, Shizuoka, Japan. jkitano@nig.ac.jp.ORCID http://orcid.org/0000-0001-8659-5698
National Institute of Genetics · JPUniversity of the Ryukyus · JPIndonesian Institute of Sciences · IDKeio University · JPNational Institute for Basic Biology · JPRyukoku University · JPSam Ratulangi University · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sexual selection drives rapid phenotypic diversification of mating traits. However, we know little about the causative genes underlying divergence in sexually selected traits. Here, we investigate the genetic basis of male mating trait diversification in the medaka fishes (genus Oryzias) from Sulawesi, Indonesia. Using linkage mapping, transcriptome analysis, and genome editing, we identify csf1 as a causative gene for red pectoral fins that are unique to male Oryzias woworae. A cis-regulatory mutation enables androgen-induced expression of csf1 in male fins. csf1-knockout males have reduced red coloration and require longer for mating, suggesting that coloration can contribute to male reproductive success. Contrary to expectations, non-red males are more attractive to a predatory fish than are red males. Our results demonstrate that integrating genomics with genome editing enables us to identify causative genes underlying sexually selected traits and provides a new avenue for testing theories of sexual selection.

Indexed as

Gene EditingGenetic FitnessSex CharacteristicsAnimal FinsAnimalsFemaleGene Expression RegulationGenetic Association StudiesIndonesiaMacrophage Colony-Stimulating FactorMaleMutationOryziasPhylogenyPigmentationPredatory BehaviorMacrophage Colony-Stimulating Factor

Identifiers

PMID33649298
PMCPMC7921647
OpenAlexW3133836142

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.