Evidence map›Paper›PMID 33649224›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Structural basis for a bacterial Pip system plant effector recognition protein.

Shukun Luo, Bruna G Coutinho, Prikshat Dadhwal, Yasuhiro Oda, Jiahong Ren, Amy L Schaefer, E Peter Greenberg, Caroline S Harwood, Liang Tong

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Shukun LuoDepartment of Biological Sciences, Columbia University, New York, NY 10027.ORCID 0000-0002-2766-3125
Bruna G CoutinhoDepartment of Microbiology, University of Washington, Seattle, WA 98195.
Prikshat DadhwalDepartment of Biological Sciences, Columbia University, New York, NY 10027.ORCID 0000-0002-4301-4766
Yasuhiro OdaDepartment of Microbiology, University of Washington, Seattle, WA 98195.ORCID 0000-0003-2554-7371
Jiahong RenFaculty of Biological Science and Technology, Changzhi University, 046011 Shanxi, China.ORCID 0000-0002-1828-0480
Amy L SchaeferDepartment of Microbiology, University of Washington, Seattle, WA 98195.ORCID 0000-0003-0581-054X
E Peter GreenbergDepartment of Microbiology, University of Washington, Seattle, WA 98195; epgreen@uw.edu csh5@u.washington.edu ltong@columbia.edu.ORCID 0000-0001-9474-8041
Caroline S HarwoodDepartment of Microbiology, University of Washington, Seattle, WA 98195; epgreen@uw.edu csh5@u.washington.edu ltong@columbia.edu.ORCID 0000-0003-4450-5177
Liang TongDepartment of Biological Sciences, Columbia University, New York, NY 10027; epgreen@uw.edu csh5@u.washington.edu ltong@columbia.edu.ORCID 0000-0002-0563-6468
University of Washington · USColumbia University · USChangzhi University · CN

Funding

Structural and functional studies of mRNA processing, stability and quality controlR35GM118093 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI LIANG TONG · 2016 to 2026
$8.5M
Quorum sensing in Pseudomonas aeruginosa - Equipment SupplementR35GM136218 · NIGMS · UNIVERSITY OF WASHINGTON · PI Everett P Greenberg · 2020 to 2026
$2.9M
Replacement of an aging X-ray diffraction system for protein crystallographyS10OD012018 · OD · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI TONG, LIANG · 2012 to 2012
$405k
IN VIVO STUDIES OF YEAST COXII TOPOGENESISF32GM018093 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HE, SHICHUAN · 1997 to 1998
–
NIGMS NIH HHS F32 GM018093NIGMS NIH HHS R35 GM118093NIGMS NIH HHS R35 GM136218NIH HHS S10 OD012018
6 · The paper itself

Abstract

A number of plant-associated proteobacteria have LuxR family transcription factors that we refer to as PipR subfamily members. PipR proteins play roles in interactions between bacteria and their plant hosts, and some are important for bacterial virulence of plants. We identified an ethanolamine derivative,

Indexed as

AcetamidesBacterial ProteinsBinding SitesCrystallography, X-RayPseudomonas syringaeAcetamidesBacterial ProteinsN-(2-hydroxyethyl)-2-(2-hydroxyethylamino) acetamidePopulusPseudomonas signalingsubstrate-binding protein

Identifiers

PMID33649224
PMCPMC7958261
OpenAlexW3135719226

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.