Evidence map›Paper›PMID 33649222›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Host genetic control of natural killer cell diversity revealed in the Collaborative Cross.

Magali S J Dupont, Vincent Guillemot, Pascal Campagne, Nicolas Serafini, Solenne Marie, Xavier Montagutelli, James P Di Santo, Christian A J Vosshenrich

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Magali S J DupontInnate Immunity Unit, Immunology Department, Institut Pasteur, 75724 Paris, France.ORCID 0000-0002-7267-6726
Vincent GuillemotBioinformatics and Biostatistics Hub, Computational Biology Department, Institut Pasteur, 75724 Paris, France.
Pascal CampagneBioinformatics and Biostatistics Hub, Computational Biology Department, Institut Pasteur, 75724 Paris, France.
Nicolas SerafiniInnate Immunity Unit, Immunology Department, Institut Pasteur, 75724 Paris, France.
Solenne MarieInnate Immunity Unit, Immunology Department, Institut Pasteur, 75724 Paris, France.
Xavier MontagutelliMouse Genetics Laboratory, Department of Genomes and Genetics, Institut Pasteur, 75724 Paris, France.ORCID 0000-0002-9372-5398
James P Di SantoInnate Immunity Unit, Immunology Department, Institut Pasteur, 75724 Paris, France.ORCID 0000-0002-7146-1862
Christian A J VosshenrichInnate Immunity Unit, Immunology Department, Institut Pasteur, 75724 Paris, France; christian.vosshenrich@pasteur.fr.ORCID 0000-0002-4407-8649

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural killer (NK) cells are innate effectors armed with cytotoxic and cytokine-secreting capacities whose spontaneous antitumor activity is key to numerous immunotherapeutic strategies. However, current mouse models fail to mirror the extensive immune system variation that exists in the human population which may impact on NK cell-based therapies. We performed a comprehensive profiling of NK cells in the Collaborative Cross (CC), a collection of novel recombinant inbred mouse strains whose genetic diversity matches that of humans, thereby providing a unique and highly diverse small animal model for the study of immune variation. We demonstrate that NK cells from CC strains displayed a breadth of phenotypic and functional variation reminiscent of that reported for humans with regards to cell numbers, key marker expression, and functional capacities. We took advantage of the vast genetic diversity of the CC and identified nine genomic loci through quantitative trait locus mapping driving these phenotypic variations. SNP haplotype patterns and variant effect analyses identified candidate genes associated with lung NK cell numbers, frequencies of CD94

Indexed as

Antigens, LyNatural Cytotoxicity Triggering Receptor 1NK Cell Lectin-Like Receptor Subfamily DPolymorphism, Single NucleotideAnimalsCrosses, GeneticGene Expression RegulationKiller Cells, NaturalMiceMice, Inbred StrainsQuantitative Trait LociAntigens, LyNatural Cytotoxicity Triggering Receptor 1Ncr1 protein, mouseNK Cell Lectin-Like Receptor Subfamily DCollaborative Crossinnate immunityNK cellsquantitative trait locus mapping

Identifiers

PMID33649222
PMCPMC7958182

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.