Evidence map›Paper›PMID 33649182›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Genome wide association study of HTLV-1-associated myelopathy/tropical spastic paraparesis in the Japanese population.

Marina Penova, Shuji Kawaguchi, Jun-Ichirou Yasunaga, Takahisa Kawaguchi, Tomoo Sato, Meiko Takahashi, Masakazu Shimizu, Mineki Saito, Kunihiro Tsukasaki, Masanori Nakagawa and 15 more

Open access · hybridAbstract readMulticenter Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it, 35 citations in OpenAlex.

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  5. Epidemiology and Clinical Outcomes of HTLV-1: A Comprehensive Narrative Review of Endemic and Nonendemic Regions.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 2 countries.

Marina PenovaCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.
Shuji KawaguchiCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.ORCID 0000-0002-4045-6518
Jun-Ichirou YasunagaLaboratory of Virus Control, Institute for Virus Research, Kyoto University, Sakyo-ku, 606-8507 Kyoto, Japan.ORCID 0000-0002-7939-2080
Takahisa KawaguchiCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.ORCID 0000-0001-7781-7404
Tomoo SatoDepartment of Rare Diseases Research, Institute of Medical Science, St. Marianna University School of Medicine, Miyamae-ku, Kawasaki, 216-8511 Kanagawa, Japan.ORCID 0000-0001-8439-3128
Meiko TakahashiCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.ORCID 0000-0002-8344-5472
Masakazu ShimizuCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.
Mineki SaitoDepartment of Microbiology, Kawasaki Medical School, Kurashiki, 701-0192 Okayama, Japan.ORCID 0000-0001-8208-5586
Kunihiro TsukasakiDepartment of Hematology, International Medical Center, Saitama Medical University, Hidaka, 350-1298 Saitama, Japan.ORCID 0000-0001-7219-5589
Masanori NakagawaDepartment of Neurology, Kyoto Prefectural University of Medicine Graduate School of Medical Science, Kamigyo-ku, 602-8566 Kyoto, Japan.
Norihiro TakenouchiDepartment of Microbiology, Kansai Medical University, Hirakata, 573-1010 Osaka, Japan.ORCID 0000-0002-7924-8468
Hideo HaraDivision of Neurology, Department of Internal Medicine, Saga University Faculty of Medicine, Saga, 849-8501 Saga, Japan.ORCID 0000-0003-3289-3555
Eiji MatsuuraDepartment of Neurology and Geriatrics, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, 890-8544 Kagoshima, Japan.ORCID 0000-0001-8215-8853
Satoshi NozumaDepartment of Neurology and Geriatrics, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, 890-8544 Kagoshima, Japan.
Hiroshi TakashimaDepartment of Neurology and Geriatrics, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, 890-8544 Kagoshima, Japan.
Shuji IzumoDepartment of Molecular Pathology, Center for Chronic Viral Diseases, Kagoshima University, Kagoshima, 890-8544 Kagoshima, Japan.
Toshiki WatanabeThe Institute of Medical Science and Future Center Initiative, The University of Tokyo, Kashiwa, 277-0871 Chiba, Japan.ORCID 0000-0002-1198-3773
Kaoru UchimaruDepartment of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Minato-ku, 108-8639 Tokyo, Japan.
Masako IwanagaDepartment of Frontier Life Sciences, Unit of Basic Medical Sciences, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, 852-8588 Nagasaki, Japan.ORCID 0000-0003-1148-6192
Atae UtsunomiyaDepartment of Hematology, Imamura General Hospital, Kagoshima, 890-0064 Kagoshima, Japan.ORCID 0000-0002-8843-406X
Yasuharu TabaraCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan.
Richard PaulInstitut Pasteur-Kyoto University International Mixed Research Unit for Vaccinomics, Institut Pasteur, 75015 Paris, France.ORCID 0000-0002-0665-5089
Yoshihisa YamanoDepartment of Rare Diseases Research, Institute of Medical Science, St. Marianna University School of Medicine, Miyamae-ku, Kawasaki, 216-8511 Kanagawa, Japan.ORCID 0000-0001-7527-0345
Masao MatsuokaLaboratory of Virus Control, Institute for Virus Research, Kyoto University, Sakyo-ku, 606-8507 Kyoto, Japan.ORCID 0000-0002-0473-754X
Fumihiko MatsudaCenter for Genomic Medicine, Kyoto University Graduate School of Medicine, Sakyo-ku, 606-8507 Kyoto, Japan; fumi@genome.med.kyoto-u.ac.jp.ORCID 0000-0003-4557-4553
Kyoto University · JPKagoshima University · JPInstitut Pasteur · FRSt. Marianna University School of Medicine · JPThe University of Tokyo · JPImamura Hospital · JPKansai Medical University · JPKawasaki Medical School · JPKyoto Prefectural University of Medicine · JPNagasaki University · JPSaga University · JPSaitama Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HTLV-1-associated myelopathy (HAM/TSP) is a chronic and progressive inflammatory disease of the central nervous system. The aim of our study was to identify genetic determinants related to the onset of HAM/TSP in the Japanese population. We conducted a genome-wide association study comprising 753 HAM/TSP patients and 899 asymptomatic HTLV-1 carriers. We also performed comprehensive genotyping of

Indexed as

Genome-Wide Association StudyChromosome MappingHLA AntigensHumansHuman T-lymphotropic virus 1JapanParaparesis, Tropical SpasticPolymorphism, Single NucleotideViral LoadHLA Antigensgenome-wide association studyHAM/TSPHLAHTLV-1proviral load

Identifiers

PMID33649182
PMCPMC7980450
OpenAlexW3133904099

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.