Evidence map›Paper›PMID 33644933›Full record

ArticleHuman mutation2021

Phenotypic and protein localization heterogeneity associated with AHDC1 pathogenic protein-truncating alleles in Xia-Gibbs syndrome.

Michael M Khayat, He Li, Varuna Chander, Jianhong Hu, Adam W Hansen, Shoudong Li, Josh Traynelis, Hua Shen, George Weissenberger, Fabio Stossi and 8 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Phenotypic subtypes of Xia-Gibbs syndrome: a latent class analysis.European journal of human genetics : EJHG · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Molecular syndromology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Novel frameshift mutation in theWorld journal of clinical cases · 2022
    Article
  12. Article
  13. HGG advances · 2021
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Michael M KhayatHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-5452-3147
He LiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-1766-5311
Varuna ChanderHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Jianhong HuHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Adam W HansenHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-8123-2679
Shoudong LiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Josh TraynelisHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Hua ShenHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
George WeissenbergerHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Fabio StossiIntegrated Microscopy Core, Advanced Technology Cores, Dan L Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas, USA.
Hannah L JohnsonIntegrated Microscopy Core, Advanced Technology Cores, Dan L Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas, USA.
James R LupskiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-9907-9246
Jennifer E PoseyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-4814-6765
Aniko SaboHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-9667-8072
Qingchang MengHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
David R MurdockHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Michael WanglerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Richard A GibbsHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.
Baylor College of Medicine · US

Funding

Genomic Architecture of Common Disease in Diverse Populations: WGS of Ongoing Hemorrhagic Stroke Study SupplementUM1HG008898 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI GIBBS, RICHARD A · 2016 to 2020
$77.0M
Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
TRAINING PROGRAM IN COMPUTATIONAL BIOLOGY AND MEDICINET15LM007093 · NLM · RICE UNIVERSITY · PI Lydia E. Kavraki · 1992 to 2026
$20.8M
Baylor-Johns Hopkins Center for Mendelian GeneticsU54HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2012 to 2015
$15.6M
Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
Individual genomic analyses to discover the molecular basis and mechanisms contributing to adult-onset diseaseK08HG008986 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI POSEY, JENNIFER ELLEN · 2017 to 2021
$831k
NCI NIH HHS P30 CA125123NHGRI NIH HHS K08 HG008986NHGRI NIH HHS U54 HG006542NHGRI NIH HHS UM1 HG006542NHGRI NIH HHS UM1 HG008898NIDDK NIH HHS P30 DK056338NLM NIH HHS T15 LM007093
6 · The paper itself

Abstract

Xia-Gibbs syndrome (XGS) is a rare Mendelian disease typically caused by de novo stop-gain or frameshift mutations in the AT-hook DNA binding motif containing 1 (AHDC1) gene. Patients usually present in early infancy with hypotonia and developmental delay and later exhibit intellectual disability (ID). The overall presentation is variable, however, and the emerging clinical picture is still evolving. A detailed phenotypic analysis of 34 XGS individuals revealed five core phenotypes (delayed motor milestones, speech delay, low muscle tone, ID, and hypotonia) in more than 80% of individuals and an additional 12 features that occurred more variably. Seizures and scoliosis were more frequently associated with truncations that arise before the midpoint of the protein although the occurrence of most features could not be predicted by the mutation position. Transient expression of wild type and different patient truncated AHDC1 protein forms in human cell lines revealed abnormal patterns of nuclear localization including a diffuse distribution of a short truncated form and nucleolar aggregation in mid-protein truncated forms. Overall, both the occurrence of variable phenotypes and the different distribution of the expressed protein reflect the heterogeneity of this syndrome.

Indexed as

Abnormalities, MultipleIntellectual DisabilityAllelesDNA-Binding ProteinsHumansMutationPhenotypeSyndromeAHDC1 protein, humanDNA-Binding ProteinsAHDC1AT-hook proteinphenotypic spectrumprotein truncationXia-Gibbs syndrome

Identifiers

PMID33644933
PMCPMC8115934
OpenAlexW3135042504

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.