ArticleHorticulture research2021
Tracing founder haplotypes of Japanese apple varieties: application in genomic prediction and genome-wide association study.
Article in Horticulture research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
21 citing papers in PubMed, 47 citations in OpenAlex.
- Candidate genes with antagonistic roles in stomatal development are associated with population-wide variation in apple.Horticulture research · 2026Article
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- Genome-wide association study and genomic prediction of fruit weight in spinach.Scientific reports · 2026Article
- Haplotype bias detection using pedigree-based transmission simulation: traces of selection that occurred in apple breeding.Horticulture research · 2026Article
- Application of Genome-Assisted Prediction (GAP) for Apple Fruit Weight.Plants (Basel, Switzerland) · 2025Article
- Phased T2T genome assemblies facilitate the mining of disease-resistance genes inHorticulture research · 2025Article
- Evaluation of genomic and phenomic prediction for application in apple breeding.BMC plant biology · 2025Article
- Genome-wide association study and genome prediction of tallness trait in spinach phenotyping.Frontiers in plant science · 2025Article
- Why we thrive beneath a northern sky - genomic signals of selection in apple for adaptation to northern Sweden.Heredity · 2024Article
- Genomic prediction and genome-wide association study using combined genotypic data from different genotyping systems: application to apple fruit quality traits.Horticulture research · 2024Article
- The genetic basis of apple shape and size unraveled by digital phenotyping.G3 (Bethesda, Md.) · 2024Article
- OmicsSuite: a customized and pipelined suite for analysis and visualization of multi-omics big data.Horticulture research · 2023Article
- Genetic structure analysis and identifying key founder inbred lines in diverse elite sub-tropical maize inbred lines.Scientific reports · 2023Article
- Genomewide selection for fruit quality traits in apple: breeding insights gained from prediction and postdiction.Horticulture research · 2023Article
- A metabolic perspective of selection for fruit quality related to apple domestication and improvement.Genome biology · 2023Article
- Dissection of the Pearl of Csaba pedigree identifies key genomic segments related to early ripening in grape.Plant physiology · 2023Article
- Boosting grapevine breeding for climate-smart viticulture: from genetic resources to predictive genomics.Frontiers in plant science · 2023Review
- A bulked segregant analysis tool for out-crossing species (BSATOS) and QTL-based genomics-assisted prediction of complex traits in apple.Journal of advanced research · 2022Article
- Integer programming for selecting set of informative markers in paternity inference.BMC bioinformatics · 2022Article
- Combining genetic resources and elite material populations to improve the accuracy of genomic prediction in apple.G3 (Bethesda, Md.) · 2022Article
Corrections and comments
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Authors and funding
12 authors at 5 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Haplotypes provide useful information for genomics-based approaches, genomic prediction, and genome-wide association study. As a small number of superior founders have contributed largely to the breeding history of fruit trees, the information of founder haplotypes may be relevant for performing the genomics-based approaches in these plants. In this study, we proposed a method to estimate 14 haplotypes from 7 founders and automatically trace the haplotypes forward to apple parental (185 varieties) and breeding (659 F
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.