Evidence map›Paper›PMID 33641490›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2021

Impact of Preanalytical Factors on the Measurement of Tumor Tissue Biomarkers Using Immunohistochemistry.

Aditi Bagchi, Zachary Madaj, Kelly B Engel, Ping Guan, Daniel C Rohrer, Dana R Valley, Emily Wolfrum, Kristin Feenstra, Nancy Roche, Galen Hostetter and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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  10. Considerations for Whole-Slide Analysis of Murine Xenografts Experiments.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Aditi BagchiPathology and Biorepository Core, Van Andel Institute, Grand Rapids, Michigan.
Zachary MadajBioinformatics and Biostatistics Core, Van Andel Institute, Grand Rapids, Michigan.
Kelly B EngelPreferred Solutions Group, Rockville, Maryland.
Ping GuanBiorepositories and Biospecimen Research Branch, National Cancer Institute, Bethesda, Maryland.
Daniel C RohrerPathology and Biorepository Core.
Dana R ValleyPathology and Biorepository Core.
Emily WolfrumBioinformatics and Biostatistics Core, Van Andel Institute, Grand Rapids, Michigan.
Kristin FeenstraPathology and Biorepository Core, Van Andel Institute, Grand Rapids, Michigan.
Nancy RocheLeidos Biomedical Research, Inc., Frederick, Maryland.
Galen HostetterPathology and Biorepository Core, Van Andel Institute, Grand Rapids, Michigan.
Helen M MooreBiorepositories and Biospecimen Research Branch, National Cancer Institute, Bethesda, Maryland.
Scott D JewellPathology and Biorepository Core, Van Andel Institute, Grand Rapids, Michigan.
Van Andel Institute · USNational Cancer Institute · USLeidos (United States) · USSpectrum Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Analysis of formalin-fixed paraffin-embedded (FFPE) tissue by immunohistochemistry (IHC) is commonplace in clinical and research laboratories. However, reports suggest that IHC results can be compromised by biospecimen preanalytical factors. The National Cancer Institute's Biospecimen Preanalytical Variables Program conducted a systematic study to examine the potential effects of delay to fixation (DTF) and time in fixative (TIF) on IHC using 24 cancer biomarkers. Differences in IHC staining, relative to controls with a DTF of 1 hr, were observed in FFPE kidney tumor specimens after a DTF of ≥2 hr. Reductions in H-score and/or staining intensity were observed for c-MET, p53, PAX2, PAX8, pAKT, and survivin, whereas increases were observed for RCC1, EGFR, and CD10. Prolonged TIF of 72 hr resulted in significantly reduced H-scores of CD44 and c-Met in kidney tumor specimens, compared with controls with 12-hr TIF. An elevated probability of altered staining intensity due to DTF was observed for nine antigens, whereas for prolonged TIF an elevated probability was observed for one antigen. Results reported here and elsewhere across tumor types and antigens support limiting DTF to ≤1 hr when possible and fixing tissues in formalin for 12-24 hr to avoid confounding effects of these preanalytical factors on IHC.

Indexed as

Biomarkers, TumorImmunohistochemistryFormaldehydeHumansKidney NeoplasmsNeoplasmsParaffin EmbeddingTime FactorsTissue FixationBiomarkers, TumorFormaldehydedelay to fixationFFPEformalin-fixed paraffin-embeddedpreanalytical factorspreanalytical variablestime in fixative

Identifiers

PMID33641490
PMCPMC8091543
OpenAlexW3134984405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.