Evidence map›Paper›PMID 33639927›Full record

ArticleBMC medical informatics and decision making2021

Mutation-based clustering and classification analysis reveals distinctive age groups and age-related biomarkers for glioma.

Claire Jean-Quartier, Fleur Jeanquartier, Aydin Ridvan, Matthias Kargl, Tica Mirza, Tobias Stangl, Robi Markaĉ, Mauro Jurada, Andreas Holzinger

Abstract read
In one paragraph

Article in BMC medical informatics and decision making, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

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2 · The registry

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
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  5. A Risk Signature Consisting of Eight mCellular and molecular neurobiology · 2022
    Article
  6. Article
  7. Machine learning analysis of TCGA cancer data.PeerJ. Computer science · 2021
    Article
  8. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors.

Claire Jean-Quartier *Human-Centered AI Lab (Holzinger Group), Institute for Medical Informatics, Statistics and Documentation, Medical University Graz, Auenbruggerplatz 2/V, 8036, Graz, Austria.
Fleur Jeanquartier *Human-Centered AI Lab (Holzinger Group), Institute for Medical Informatics, Statistics and Documentation, Medical University Graz, Auenbruggerplatz 2/V, 8036, Graz, Austria. fleur.jeanquartier@tugraz.at.
Aydin RidvanInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Matthias KarglInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Tica MirzaInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Tobias StanglInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Robi MarkaĉInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Mauro JuradaInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.
Andreas HolzingerInstitute of Interactive Systems and Data Science, Graz University of Technology, Graz, Austria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMalignant brain tumor diseases exhibit differences within molecular features depending on the patient's age.

methodsIn this work, we use gene mutation data from public resources to explore age specifics about glioma. We use both an explainable clustering as well as classification approach to find and interpret age-based differences in brain tumor diseases. We estimate age clusters and correlate age specific biomarkers.

resultsAge group classification shows known age specifics but also points out several genes which, so far, have not been associated with glioma classification.

conclusionsWe highlight mutated genes to be characteristic for certain age groups and suggest novel age-based biomarkers and targets.

Indexed as

GliomaIsocitrate DehydrogenaseBiomarkers, TumorCluster AnalysisHumansMutationBiomarkers, TumorIsocitrate DehydrogenaseAge clustersexplainable artificial intelligenceGlioma classificationIDH1K-Meanspediatric cancerRandom ForestXAI

Identifiers

PMID33639927
PMCPMC7913451

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.