Evidence map›Paper›PMID 33639886›Full record

ArticleBMC infectious diseases2021

Molecular investigation of an outbreak associated with total parenteral nutrition contaminated with NDM-producing Leclercia adecarboxylata.

Elvira Garza-González, Paola Bocanegra-Ibarias, Eduardo Rodríguez-Noriega, Esteban González-Díaz, Jesús Silva-Sanchez, Ulises Garza-Ramos, Iván Fernando Contreras-Coronado-Tovar, José Ecil Santos-Hernández, David Gutiérrez-Bañuelos, Juan Pablo Mena-Ramirez and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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  4. Postoperative Empyema Due toPathogens (Basel, Switzerland) · 2025
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  6. Resistance phenotype and virulence potential ofMicrobiology (Reading, England) · 2024
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  7. Article
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  9. A case-control study of infections caused byFrontiers in cellular and infection microbiology · 2022
    Article
  10. Pathogens (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Elvira Garza-González *Hospital Universitario Dr. José Eleuterio González, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, Mexico.
Paola Bocanegra-Ibarias *Hospital Universitario Dr. José Eleuterio González, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, Mexico.
Eduardo Rodríguez-NoriegaHospital Civil de Guadalajara Fray Antonio Alcalde, Instituto de Patología Infecciosa y Experimental, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, Mexico.
Esteban González-DíazHospital Civil de Guadalajara Fray Antonio Alcalde, Instituto de Patología Infecciosa y Experimental, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, Mexico.
Jesús Silva-SanchezCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Cuernavaca, Morelos, Mexico.
Ulises Garza-RamosCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Cuernavaca, Morelos, Mexico.
Iván Fernando Contreras-Coronado-TovarHospital de Pediatría de Centro Médico Nacional de Occidente, Guadalajara, Jalisco, Mexico.
José Ecil Santos-HernándezHospital de Pediatría de Centro Médico Nacional de Occidente, Guadalajara, Jalisco, Mexico.
David Gutiérrez-BañuelosHospital de Pediatría de Centro Médico Nacional de Occidente, Guadalajara, Jalisco, Mexico.
Juan Pablo Mena-RamirezHospital General de Zona No.21 IMSS, Centro Universitario de los Altos (CUALTOS), Universidad de Guadalajara, Tepatitlán de Morelos, Jalisco, Mexico.
Saúl Ramírez-De-Los-SantosInstituto de Investigación en Biociencias, Centro Universitario de los Altos, Universidad de Guadalajara, Tepatitlán de Morelos, Jalisco, Mexico.
Adrián Camacho-OrtizHospital Universitario Dr. José Eleuterio González, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, Mexico.
Rayo Morfín-OteroHospital Civil de Guadalajara Fray Antonio Alcalde, Instituto de Patología Infecciosa y Experimental, Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara, Jalisco, Mexico. rayomorfin@gmail.com.ORCID http://orcid.org/0000-0001-9576-1950
Universidad de Guadalajara · MXUniversidad Autónoma de Nuevo León · MXInstituto Nacional de Salud Pública · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study aimed to determine the epidemiological, microbiological, and molecular characteristics of an outbreak of carbapenem-resistant Leclercia adecarboxylata in three hospitals associated with the unintended use of contaminated total parental nutrition (TPN).

methodsFor 10 days, 25 patients who received intravenous TPN from the same batch of a formula developed sepsis and had blood cultures positive for L. adecarboxylata. Antimicrobial susceptibility and carbapenemase production were performed in 31 isolates, including one from an unopened bottle of TPN. Carbapenemase-encoding genes, extended-spectrum β-lactamase-encoding genes were screened by PCR, and plasmid profiles were determined. Horizontal transfer of carbapenem resistance was performed by solid mating. Clonal diversity was performed by pulsed-field gel electrophoresis. The resistome was explored by whole-genome sequencing on two selected strains, and comparative genomics was performed using Roary.

resultsAll 31 isolates were resistant to aztreonam, cephalosporins, carbapenems, trimethoprim/sulfamethoxazole, and susceptible to gentamicin, tetracycline, and colistin. Lower susceptibility to levofloxacin (51.6%) and ciprofloxacin (22.6%) was observed. All the isolates were carbapenemase producers and positive for bla

conclusionWe present epidemiological, microbiological, and molecular evidence of an outbreak of carbapenem-resistant L. adecarboxylata in three hospitals in western Mexico associated with the use of contaminated TPN.

Indexed as

Disease OutbreaksAnti-Bacterial AgentsBacteremiabeta-LactamasesCarbapenem-Resistant EnterobacteriaceaeChildEnterobacteriaceaeEnterobacteriaceae InfectionsGenome, BacterialHospitalsHumansMexicoMicrobial Sensitivity TestsMultilocus Sequence TypingParenteral Nutrition, TotalPhylogenyAnti-Bacterial Agentsbeta-LactamasesBloodstream infectionsCarbapenem-resistant L. adecarboxylataContaminated total parenteral nutritionNDM-carrying Leclercia adecarboxylataOutbreak of L. adecarboxylata

Identifiers

PMID33639886
PMCPMC7916303
OpenAlexW3133776502

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.