Evidence map›Paper›PMID 33639418›Full record

ReviewMolecular & cellular proteomics : MCP2021

Interspecies Differences in Proteome Turnover Kinetics Are Correlated With Life Spans and Energetic Demands.

Kyle Swovick, Denis Firsanov, Kevin A Welle, Jennifer R Hryhorenko, John P Wise, Craig George, Todd L Sformo, Andrei Seluanov, Vera Gorbunova, Sina Ghaemmaghami

Open access · hybridAbstract readReview
In one paragraph

Review in Molecular & cellular proteomics : MCP, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Urinary metabolome dynamics inMetabolomics : Official journal of the Metabolomic Society · 2025
    Article
  4. miRNA modules for precise, tunable control of gene expression.bioRxiv : the preprint server for biology · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Epigenetic control and manipulation of neuronal maturation timing.Current opinion in genetics & development · 2024
    Review
  14. The stem cell zoo for comparative studies of developmental tempo.Current opinion in genetics & development · 2024
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Kyle SwovickDepartment of Biology, University of Rochester, Rochester, New York, USA.
Denis FirsanovDepartment of Biology, University of Rochester, Rochester, New York, USA.
Kevin A WelleMass Spectrometry Resource Laboratory, University of Rochester, Rochester, New York, USA.
Jennifer R HryhorenkoMass Spectrometry Resource Laboratory, University of Rochester, Rochester, New York, USA.
John P WiseDepartment of Pharmacology and Toxicology, Wise Laboratory for Environmental and Genetic Toxicology, University of Louisville, Louisville, Kentucky, USA.
Craig GeorgeNorth Slope Borough Department of Wildlife Management, Barrow, Alaska, USA.
Todd L SformoNorth Slope Borough Department of Wildlife Management, Barrow, Alaska, USA; Institute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, Alaska, USA.
Andrei SeluanovDepartment of Biology, University of Rochester, Rochester, New York, USA.
Vera GorbunovaDepartment of Biology, University of Rochester, Rochester, New York, USA.
Sina GhaemmaghamiDepartment of Biology, University of Rochester, Rochester, New York, USA; Mass Spectrometry Resource Laboratory, University of Rochester, Rochester, New York, USA. Electronic address: sina.ghaemmaghami@rochester.edu.
University of Rochester · USNorth Slope Borough · USUniversity of Alaska Fairbanks · USUniversity of Louisville · US

Funding

The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI Andrei Seluanov · 2014 to 2026
$36.9M
Somatic Activation of Retrotransposition: A New Molecular Mechanism of Aging?P01AG051449 · NIA · BROWN UNIVERSITY · PI John M Sedivy · 2016 to 2026
$30.4M
The role of SIRT6 posttranslational modifications in aging and genome stability. Supplement: Testing SIRT6 activators as potential Alzheimer's disease therapy.R01AG027237 · NIA · UNIVERSITY OF ROCHESTER · PI Vera Gorbunova · 2006 to 2026
$6.2M
The prevalence and mechanism of selectivity in basal autophagyR35GM119502 · NIGMS · UNIVERSITY OF ROCHESTER · PI SINA GHAEMMAGHAMI · 2016 to 2026
$5.9M
Regulation of epigenome stability by SIRT6 during aging. Supplement: Does centenarian variant of SIRT6 or bowhead whale SIRT6 confer protection from Alzheimer's disease?R37AG046320 · NIA · UNIVERSITY OF ROCHESTER · PI Andrei Seluanov · 2019 to 2026
$4.7M
Orbitrap Fusion Lumos Mass Spectrometer for UR Proteomics ResearchS10OD025242 · OD · UNIVERSITY OF ROCHESTER · PI GHAEMMAGHAMI, SINA · 2018 to 2018
$1.1M
NIA NIH HHS P01 AG047200NIA NIH HHS P01 AG051449NIA NIH HHS R01 AG027237NIA NIH HHS R37 AG046320NIGMS NIH HHS R35 GM119502NIH HHS S10 OD025242
6 · The paper itself

Abstract

Cells continually degrade and replace damaged proteins. However, the high energetic demand of protein turnover generates reactive oxygen species that compromise the long-term health of the proteome. Thus, the relationship between aging, protein turnover, and energetic demand remains unclear. Here, we used a proteomic approach to measure rates of protein turnover within primary fibroblasts isolated from a number of species with diverse life spans including the longest-lived mammal, the bowhead whale. We show that organismal life span is negatively correlated with turnover rates of highly abundant proteins. In comparison with mice, cells from long-lived naked mole rats have slower rates of protein turnover, lower levels of ATP production, and reduced reactive oxygen species levels. Despite having slower rates of protein turnover, naked mole rat cells tolerate protein misfolding stress more effectively than mouse cells. We suggest that in lieu of a rapid constitutive turnover, long-lived species may have evolved more energetically efficient mechanisms for selective detection and clearance of damaged proteins.

Indexed as

ProteomeAmino AcidsAnimalsHumansKineticsLightLongevityPharmaceutical PreparationsProteomicsRadioisotopesSpecies SpecificityAmino AcidsPharmaceutical PreparationsProteomeRadioisotopesagingprotein degradationProtein turnoveproteostasisquantitative proteomics

Identifiers

PMID33639418
PMCPMC7950207
OpenAlexW3115575573

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.