Evidence map›Paper›PMID 33637824›Full record

ArticleScientific reports2021

A DNA barcode-based survey of wild urban bees in the Loire Valley, France.

Irene Villalta, Romain Ledet, Mathilde Baude, David Genoud, Christophe Bouget, Maxime Cornillon, Sébastien Moreau, Béatrice Courtial, Carlos Lopez-Vaamonde

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The genome sequence of Trimmer's Mining Bee,Wellcome open research · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
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  11. Keeping Up with Insect Pollinators in Paris.Animals : an open access journal from MDPI · 2022
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Irene VillaltaIRBI, UMR 7261, CNRS, Université de Tours, Tours, France. irenevillaltaalonso@gmail.com.
Romain LedetINRAE USC 1328, LBLGC EA 1207, Université d'Orléans, Orléans, France.
Mathilde BaudeINRAE USC 1328, LBLGC EA 1207, Université d'Orléans, Orléans, France.
David GenoudDomaine Bellevue 2, Arzens, France.
Christophe BougetINRAE, UR EFNO, Nogent-sur-Vernisson, France.
Maxime CornillonCETU Innophyt, Université de Tours, Tours, France.
Sébastien MoreauIRBI, UMR 7261, CNRS, Université de Tours, Tours, France.
Béatrice CourtialINRAE, URZF, Orléans, France.
Carlos Lopez-VaamondeIRBI, UMR 7261, CNRS, Université de Tours, Tours, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current decline of wild bees puts important ecosystem services such as pollination at risk. Both inventory and monitoring programs are needed to understand the causes of wild bee decline. Effective insect monitoring relies on both mass-trapping methods coupled with rapid and accurate identifications. Identifying wild bees using only morphology can be challenging, in particular, specimens from mass-trapped samples which are often in poor condition. We generated DNA barcodes for 2931 specimens representing 157 species (156 named and one unnamed species) and 28 genera. Automated cluster delineation reveals 172 BINs (Barcodes Index Numbers). A total of 36 species (22.93%) were found in highly urbanized areas. The majority of specimens, representing 96.17% of the species barcoded form reciprocally exclusive groups, allowing their unambiguous identification. This includes several closely related species notoriously difficult to identify. A total of 137 species (87.26%) show a "one-to-one" match between a named species and the BIN assignment. Fourteen species (8.92%) show deep conspecific lineages with no apparent morphological differentiation. Only two species pairs shared the same BIN making their identification with DNA barcodes alone uncertain. Therefore, our DNA barcoding reference library allows reliable identification by non-experts for the vast majority of wild bee species in the Loire Valley.

Indexed as

AnimalsBeesCitiesDNA Barcoding, TaxonomicEcosystemEndangered SpeciesFranceGene LibrarySequence Analysis, DNA

Identifiers

PMID33637824
PMCPMC7910470

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.