Evidence map›Paper›PMID 33637649›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site.

Simone Conti, Kevin J Kaczorowski, Ge Song, Katelyn Porter, Raiees Andrabi, Dennis R Burton, Arup K Chakraborty, Martin Karplus

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. An engineered antibody-lectin conjugate targeting the HIV glycan shield protects humanized mice against HIV challenge.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Simone ContiDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138.
Kevin J KaczorowskiInstitute for Medical Engineering & Science, Massachusetts Institute of Technology, Cambridge, MA 02139.
Ge SongScripps Consortium for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037.
Katelyn PorterScripps Consortium for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037.
Raiees AndrabiScripps Consortium for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037.
Dennis R BurtonScripps Consortium for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037.ORCID 0000-0001-6711-9864
Arup K ChakrabortyInstitute for Medical Engineering & Science, Massachusetts Institute of Technology, Cambridge, MA 02139; arupc@mit.edu marci@tammy.harvard.edu.
Martin KarplusDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138; arupc@mit.edu marci@tammy.harvard.edu.
Scripps Research Institute · USHarvard University · USMassachusetts Institute of Technology · USRagon Institute of MGH, MIT and Harvard · US

Funding

Identification of neutralizing epitopes on SARS-CoV-2 spike for design of vaccines and small-molecule antiviralsUM1AI144462 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 2019 to 2025
$201.6M
NIAID NIH HHS UM1 AI144462
6 · The paper itself

Abstract

A vaccine which is effective against the HIV virus is considered to be the best solution to the ongoing global HIV/AIDS epidemic. In the past thirty years, numerous attempts to develop an effective vaccine have been made with little or no success, due, in large part, to the high mutability of the virus. More recent studies showed that a vaccine able to elicit broadly neutralizing antibodies (bnAbs), that is, antibodies that can neutralize a high fraction of global virus variants, has promise to protect against HIV. Such a vaccine has been proposed to involve at least three separate stages: First, activate the appropriate precursor B cells; second, shepherd affinity maturation along pathways toward bnAbs; and, third, polish the Ab response to bind with high affinity to diverse HIV envelopes (Env). This final stage may require immunization with a mixture of Envs. In this paper, we set up a framework based on theory and modeling to design optimal panels of antigens to use in such a mixture. The designed antigens are characterized experimentally and are shown to be stable and to be recognized by known HIV antibodies.

Indexed as

AIDS VaccinesAmino Acid SequenceAntigens, ViralBinding SitesBroadly Neutralizing AntibodiesCD4-Positive T-LymphocytesCrystallography, X-RayEpitopesHIV-1HIV AntibodiesHIV Envelope Protein gp120HIV Envelope Protein gp160HIV Envelope Protein gp41HIV InfectionsHumansModels, MolecularAIDS VaccinesAntigens, ViralBroadly Neutralizing AntibodiesEpitopesgp120 protein, Human immunodeficiency virus 1gp160 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120HIV Envelope Protein gp160HIV Envelope Protein gp41broadly neutralizing antibodiesHIVvaccine design

Identifiers

PMID33637649
PMCPMC7936365
OpenAlexW3129760117

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.