Evidence map›Paper›PMID 33632859›Full record

ArticleMicrobiology resource announcements2021

In-Frame 12-Nucleotide Deletion within Open Reading Frame 3a in a SARS-CoV-2 Strain Isolated from a Patient Hospitalized with COVID-19.

John A Lednicky, Kartikeya Cherabuddi, Massimiliano S Tagliamonte, Maha A Elbadry, Kuttichantran Subramaniam, Thomas B Waltzek, J Glenn Morris

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

John A LednickyEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA jlednicky@phhp.ufl.edu.ORCID https://orcid.org/0000-0003-4069-0539
Kartikeya CherabuddiEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
Massimiliano S TagliamonteEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.ORCID https://orcid.org/0000-0003-2699-7331
Maha A ElbadryEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
Kuttichantran SubramaniamEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.ORCID https://orcid.org/0000-0002-2752-4467
Thomas B WaltzekEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
J Glenn MorrisEmerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.ORCID https://orcid.org/0000-0001-9347-1984

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain UF-8, with an in-frame 12-nucleotide deletion within open reading frame 3a (ORF3a), was isolated from a 78-year-old COVID-19 patient in March 2020.

Identifiers

PMID33632859
PMCPMC7909084

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.