Evidence map›Paper›PMID 33632144›Full record

ArticleBMC infectious diseases2021

Prevalence and antimicrobial resistance profiles of respiratory microbial flora in African children with HIV-associated chronic lung disease.

Regina E Abotsi, Mark P Nicol, Grace McHugh, Victoria Simms, Andrea M Rehman, Charmaine Barthus, Slindile Mbhele, Brewster W Moyo, Lucky G Ngwira, Hilda Mujuru and 5 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02426112 (Bronchopulmonary Function in Response to Azithromycin Treatment for Chronic Lung Disease in HIV-infected Children), which is not on this map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02426112 phase3completednot on this map

Bronchopulmonary Function in Response to Azithromycin Treatment for Chronic Lung Disease in HIV-infected Children

TypeinterventionalSponsorLondon School of Hygiene and Tropical MedicineRan2016 to 2019Enrolled347ConditionsChronic Lung Disease, HIV InfectionArmsAzithromycin, Placebo
3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 6 countries.

Regina E AbotsiDepartment of Molecular and Cell Biology & Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa. abtreg001@myuct.ac.za.
Mark P NicolDivision of Infection and Immunity, School of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Western Australia, Perth, Australia.
Grace McHughBiomedical Research and Training Institute, Harare, Zimbabwe.
Victoria SimmsMRC International Statistics & Epidemiology Group, London School of Hygiene and Tropical Medicine, London, UK.
Andrea M RehmanMRC International Statistics & Epidemiology Group, London School of Hygiene and Tropical Medicine, London, UK.
Charmaine BarthusDivision of Medical Microbiology, University of Cape Town, Cape Town, South Africa.
Slindile MbheleDivision of Medical Microbiology, University of Cape Town, Cape Town, South Africa.
Brewster W MoyoMalawi-Liverpool Wellcome Trust Clinical Research Programme, Blantyre, Malawi.
Lucky G NgwiraMalawi-Liverpool Wellcome Trust Clinical Research Programme, Blantyre, Malawi.
Hilda MujuruDepartment of Paediatrics, University of Zimbabwe, Harare, Zimbabwe.
Beauty MakamureBiomedical Research and Training Institute, Harare, Zimbabwe.
Justin MayiniBiomedical Research and Training Institute, Harare, Zimbabwe.
Jon Ø OdlandDepartment of Community Medicine, University of Tromsø, Tromsø, Norway.
Rashida A FerrandBiomedical Research and Training Institute, Harare, Zimbabwe.
Felix S DubeDepartment of Molecular and Cell Biology & Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town, South Africa.
Biomedical Research and Training Institute · ZWUniversity of Cape Town · ZALondon School of Hygiene & Tropical Medicine · GBLiverpool School of Tropical Medicine · GBMalawi-Liverpool-Wellcome Trust Clinical Research Programme · MWUniversity of Pretoria · ZAUniversity of Western Australia · AUUniversity of Zimbabwe · ZW

Funding

Medical Research Council MR/R010161/1Wellcome Trust 206316/Z/17/Z
6 · The paper itself

Abstract

backgroundHIV-associated chronic lung disease (CLD) is common among children living with HIV (CLWH) in sub-Saharan Africa, including those on antiretroviral therapy (ART). However, the pathogenesis of CLD and its possible association with microbial determinants remain poorly understood. We investigated the prevalence, and antibiotic susceptibility of Streptococcus pneumoniae (SP), Staphylococcus aureus (SA), Haemophilus influenzae (HI), and Moraxella catarrhalis (MC) among CLWH (established on ART) who had CLD (CLD+), or not (CLD-) in Zimbabwe and Malawi.

methodsNasopharyngeal swabs (NP) and sputa were collected from CLD+ CLWH (defined as forced-expiratory volume per second z-score < - 1 without reversibility post-bronchodilation with salbutamol), at enrolment as part of a randomised, placebo-controlled trial of azithromycin (BREATHE trial - NCT02426112 ), and from age- and sex-matched CLD- CLWH. Samples were cultured, and antibiotic susceptibility testing was conducted using disk diffusion. Risk factors for bacterial carriage were identified using questionnaires and analysed using multivariate logistic regression.

resultsA total of 410 participants (336 CLD+, 74 CLD-) were enrolled (median age, 15 years [IQR = 13-18]). SP and MC carriage in NP were higher in CLD+ than in CLD- children: 46% (154/336) vs. 26% (19/74), p = 0.008; and 14% (49/336) vs. 3% (2/74), p = 0.012, respectively. SP isolates from the NP of CLD+ children were more likely to be non-susceptible to penicillin than those from CLD- children (36% [53/144] vs 11% [2/18], p = 0.036). Methicillin-resistant SA was uncommon [4% (7/195)]. In multivariate analysis, key factors associated with NP bacterial carriage included having CLD (SP: adjusted odds ratio (aOR) 2 [95% CI 1.1-3.9]), younger age (SP: aOR 3.2 [1.8-5.8]), viral load suppression (SP: aOR 0.6 [0.4-1.0], SA: 0.5 [0.3-0.9]), stunting (SP: aOR 1.6 [1.1-2.6]) and male sex (SA: aOR 1.7 [1.0-2.9]). Sputum bacterial carriage was similar in both groups (50%) and was associated with Zimbabwean site (SP: aOR 3.1 [1.4-7.3], SA: 2.1 [1.1-4.2]), being on ART for a longer period (SP: aOR 0.3 [0.1-0.8]), and hot compared to rainy season (SP: aOR 2.3 [1.2-4.4]).

conclusionsCLD+ CLWH were more likely to be colonised by MC and SP, including penicillin-non-susceptible SP strains, than CLD- CLWH. The role of these bacteria in CLD pathogenesis, including the risk of acute exacerbations, should be further studied.

Indexed as

Drug Resistance, BacterialAdolescentAnti-Bacterial AgentsAnti-Retroviral AgentsBacteriaFemaleHIV InfectionsHumansLung DiseasesMalawiMaleMicrobiotaNasopharynxPrevalenceRisk FactorsZimbabweAnti-Bacterial AgentsAnti-Retroviral AgentsAntibiotic resistanceChildrenChronic lung diseaseHaemophilus influenzaeHIVMoraxella catarrhalisStaphylococcus aureusStreptococcus pneumoniae

Identifiers

PMID33632144
PMCPMC7908671
OpenAlexW3132218180

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.