Evidence map›Paper›PMID 33631804›Full record

ArticlePlant physiology2021

GENOMES UNCOUPLED1-independent retrograde signaling targets the ethylene pathway to repress photomorphogenesis.

Charlotte M M Gommers, María Águila Ruiz-Sola, Alba Ayats, Lara Pereira, Marta Pujol, Elena Monte

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Plant physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Charlotte M M GommersPlant Development and Signal Transduction Program, Center for Research in Agricultural Genomics (CSIC- IRTA-UAB-UB), Barcelona, Spain.
María Águila Ruiz-SolaPlant Development and Signal Transduction Program, Center for Research in Agricultural Genomics (CSIC- IRTA-UAB-UB), Barcelona, Spain.
Alba AyatsPlant Development and Signal Transduction Program, Center for Research in Agricultural Genomics (CSIC- IRTA-UAB-UB), Barcelona, Spain.
Lara PereiraPlant and Animal Genomics Program, Center for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Barcelona, Spain.
Marta PujolPlant and Animal Genomics Program, Center for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Barcelona, Spain.
Elena MontePlant Development and Signal Transduction Program, Center for Research in Agricultural Genomics (CSIC- IRTA-UAB-UB), Barcelona, Spain.
Center for Research in Agricultural Genomics · ESConsejo Superior de Investigaciones Científicas · ESInstitute of Agrifood Research and Technology · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When germinating in the light, Arabidopsis (Arabidopsis thaliana) seedlings undergo photomorphogenic development, characterized by short hypocotyls, greening, and expanded cotyledons. Stressed chloroplasts emit retrograde signals to the nucleus that induce developmental responses and repress photomorphogenesis. The nuclear targets of these retrograde signals are not yet fully known. Here, we show that lincomycin-treated seedlings (which lack developed chloroplasts) show strong phenotypic similarities to seedlings treated with ethylene (ET) precursor 1-aminocyclopropane-1-carboxylic acid, as both signals inhibit cotyledon separation in the light. We show that the lincomycin-induced phenotype partly requires a functioning ET signaling pathway, but could not detect increased ET emissions in response to the lincomycin treatment. The two treatments show overlap in upregulated gene transcripts, downstream of transcription factors ETHYLENE INSENSITIVE3 and EIN3-LIKE1. The induction of the ET signaling pathway is triggered by an unknown retrograde signal acting independently of GENOMES UNCOUPLED1. Our data show how two apparently different stress responses converge to optimize photomorphogenesis.

Indexed as

ArabidopsisEthylenesGene Expression Regulation, PlantGenes, PlantGenetic VariationGenotypeLightPlant DevelopmentPlant Growth RegulatorsSignal TransductionTranscription FactorsEthylenesPlant Growth RegulatorsTranscription Factors

Identifiers

PMID33631804
PMCPMC8133597
OpenAlexW3122019404

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.