Evidence map›Paper›PMID 33631277›Full record

ArticleExperimental hematology2021

Single-cell analysis of erythropoiesis in Rpl11 haploinsufficient mice reveals insight into the pathogenesis of Diamond-Blackfan anemia.

Raymond T Doty, Xiaowei Yan, Changting Meng, Christopher Lausted, Qiang Tian, Janis L Abkowitz

Open access · greenAbstract read
In one paragraph

Article in Experimental hematology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Raymond T DotyDepartment of Medicine, Division of Hematology, University of Washington, Seattle, WA. Electronic address: rtdoty@u.washington.edu.
Xiaowei YanInstitute for Systems Biology, Seattle, WA.
Changting MengInstitute for Systems Biology, Seattle, WA.
Christopher LaustedInstitute for Systems Biology, Seattle, WA.
Qiang TianInstitute for Systems Biology, Seattle, WA. Electronic address: Qiang.Tian@isbscience.org.
Janis L AbkowitzDepartment of Medicine, Division of Hematology, University of Washington, Seattle, WA.
Institute for Systems Biology · USUniversity of Washington · US

Funding

Physiology of feline leukemia virus C receptor, FLVCRR01HL031823 · NHLBI · UNIVERSITY OF WASHINGTON · PI ABKOWITZ, JANIS L · 1985 to 2024
$9.1M
(PQB-4) Single cell analysis strategy for monitoring drug responses of tumorsR01CA190122 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI TIAN, QIANG · 2014 to 2017
$2.4M
NCI NIH HHS R01 CA190122NHLBI NIH HHS R01 HL031823
6 · The paper itself

Abstract

Rpl11 haploinsufficient mice develop a macrocytic anemia similar to patients with DBA. Here, we fully characterize this model from clinical and pathophysiological perspectives. Early erythroid precursors have increased heme content and high cytoplasmic reactive oxygen species, impairing erythroid differentiation at the colony-forming unit-erythroid (CFU-E)/proerythroblast stage and subsequently. Using single-cell analyses that link a cell's surface protein expression to its total transcriptome and unbiased analyses, we found GATA1, GATA1 target gene, and mitotic spindle pathway gene transcription were the pathways that decreased the most. Expression of ribosome protein and globin genes was amplified. These changes, as well as the other transcriptional changes that were identified, closely resemble findings in mice that lack the heme export protein FLVCR and, thus, suggest that heme excess and toxicity are the primary drivers of the macrocytic anemia. Consistent with this, treating Rpl11 haploinsufficient mice with corticosteroids increased the numbers of earliest erythroblasts but failed to overcome heme toxicity and improve the anemia. Rpl11 haploinsufficient mice uniquely upregulated mitochondrial genes, p53 and CDKN1A pathway genes, and DNA damage checkpoint genes, which should contribute further to erythroid marrow failure. Together our data establish Rpl11 haploinsufficient mice as an excellent model of DBA that can be used to study DBA pathogenesis and test novel therapies.

Indexed as

ErythropoiesisHaploinsufficiencyAnemia, Diamond-BlackfanAnimalsErythroid Precursor CellsFemaleHumansMaleMiceSingle-Cell Analysis

Identifiers

PMID33631277
PMCPMC8102435
OpenAlexW3131562018

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.