Evidence map›Paper›PMID 33630763›Full record

ArticleThe Journal of clinical investigation2021

Beryllium-specific CD4+ T cells induced by chemokine neoantigens perpetuate inflammation.

Michael T Falta, Jeremy C Crawford, Alex N Tinega, Laurie G Landry, Frances Crawford, Douglas G Mack, Allison K Martin, Shaikh M Atif, Li Li, Radleigh G Santos and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  6. Interleukin-1 signaling and CD4Frontiers in immunology · 2025
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  8. Review
  9. Article
  10. Innate and Adaptive Immunity in Noninfectious Granulomatous Lung Disease.Journal of immunology (Baltimore, Md. : 1950) · 2022
    Review
  11. A fungal antigenic driver for Löfgren's syndrome sarcoidosis.The Journal of experimental medicine · 2021
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Michael T FaltaDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Jeremy C CrawfordDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Alex N TinegaDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Laurie G LandryBarbara Davis Center for Childhood Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Frances CrawfordDepartment of Biomedical Research and.
Douglas G MackDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Allison K MartinDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Shaikh M AtifDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Li LiDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Radleigh G SantosDepartment of Mathematics, Nova Southeastern University, Ft. Lauderdale, Florida, USA.
Maki NakayamaBarbara Davis Center for Childhood Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
John W KapplerDepartment of Biomedical Research and.
Lisa A MaierDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
Paul G ThomasDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Clemencia PinillaFlorida International University, Port St. Lucie, Florida, USA.
Andrew P FontenotDepartment of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado, USA.
University of Colorado Anschutz Medical Campus · USNational Jewish Health · USSt. Jude Children's Research Hospital · USFlorida International University · USNova Southeastern University · US

Funding

PATHOGENIC T CELLS IN CHRONIC BERYLLIUM DISEASER01HL062410 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FONTENOT, ANDREW P. · 1998 to 2017
$5.7M
Molecular Dissection of Insulin Targeting in Anti-Islet AutoimmunityR01DK099317 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI AARON W MICHELS, Maki Nakayama · 2013 to 2026
$5.3M
T cell epitopes in sarcoidosisR01HL136137 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI PALMER, BRENT E · 2017 to 2024
$4.7M
Role of Chemokines in Innate and Adaptive Immunity in the LungR01HL152756 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI ATIF, SHAIKH M · 2020 to 2023
$2.4M
Interactions between antigen-specific effector and regulatory T cells in beryllium-induced diseaseR01ES025534 · NIEHS · UNIVERSITY OF COLORADO DENVER · PI FONTENOT, ANDREW P. · 2016 to 2020
$2.1M
Patient-Oriented Research in Immunologic Lung Disease.K24HL102245 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FONTENOT, ANDREW P. · 2010 to 2020
$1.4M
NHLBI NIH HHS K24 HL102245NHLBI NIH HHS R01 HL062410NHLBI NIH HHS R01 HL136137NHLBI NIH HHS R01 HL152756NIDDK NIH HHS R01 DK099317NIEHS NIH HHS R01 ES025534
6 · The paper itself

Abstract

Discovering dominant epitopes for T cells, particularly CD4+ T cells, in human immune-mediated diseases remains a significant challenge. Here, we used bronchoalveolar lavage (BAL) cells from HLA-DP2-expressing patients with chronic beryllium disease (CBD), a debilitating granulomatous lung disorder characterized by accumulations of beryllium-specific (Be-specific) CD4+ T cells in the lung. We discovered lung-resident CD4+ T cells that expressed a disease-specific public CDR3β T cell receptor motif and were specific to Be-modified self-peptides derived from C-C motif ligand 4 (CCL4) and CCL3. HLA-DP2-CCL/Be tetramer staining confirmed that these chemokine-derived peptides represented major antigenic targets in CBD. Furthermore, Be induced CCL3 and CCL4 secretion in the lungs of mice and humans. In a murine model of CBD, the addition of LPS to Be oxide exposure enhanced CCL4 and CCL3 secretion in the lung and significantly increased the number and percentage of CD4+ T cells specific for the HLA-DP2-CCL/Be epitope. Thus, we demonstrate a direct link between Be-induced innate production of chemokines and the development of a robust adaptive immune response to those same chemokines presented as Be-modified self-peptides, creating a cycle of innate and adaptive immune activation.

Indexed as

AnimalsAntigensBerylliosisBerylliumCD4-Positive T-LymphocytesChemokine CCL3Chemokine CCL4Chronic DiseaseFemaleHLA-DP beta-ChainsHumansImmunity, InnateLungMaleMiceAntigensBerylliumCCL3 protein, humanCCL4 protein, humanChemokine CCL3Chemokine CCL4HLA-DP beta-ChainsHLA-DPw2 antigenAdaptive immunityPulmonologyT cell receptorT cells

Identifiers

PMID33630763
PMCPMC8087207
OpenAlexW3130982386

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.