Evidence map›Paper›PMID 33629931›Full record

ArticleRNA biology2021

Identification of RNAs bound by Hfq reveals widespread RNA partners and a sporulation regulator in the human pathogen

Pierre Boudry, Emma Piattelli, Emilie Drouineau, Johann Peltier, Anaïs Boutserin, Maxence Lejars, Eliane Hajnsdorf, Marc Monot, Bruno Dupuy, Isabelle Martin-Verstraete and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. The current riboswitch landscape inMicrobiology (Reading, England) · 2024
    Review
  7. Small proteins in Gram-positive bacteria.FEMS microbiology reviews · 2023
    Article
  8. Article
  9. Article
  10. The RgaS-RgaR two-component system promotesbioRxiv : the preprint server for biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. An RNA-centric global view ofProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Pierre BoudryUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Emma PiattelliUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Emilie DrouineauUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Johann PeltierUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.ORCID 0000-0003-3207-9465
Anaïs BoutserinUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Maxence LejarsUMR8261, CNRS, Université de Paris, Institut de Biologie Physico-Chimique, Paris, France.
Eliane HajnsdorfUMR8261, CNRS, Université de Paris, Institut de Biologie Physico-Chimique, Paris, France.ORCID 0000-0002-8249-2007
Marc MonotLaboratoire Pathogenèses des Bactéries Anaérobies, Institut Pasteur, Université de Paris, Paris, France.ORCID 0000-0003-0738-7335
Bruno DupuyLaboratoire Pathogenèses des Bactéries Anaérobies, Institut Pasteur, Université de Paris, Paris, France.ORCID 0000-0001-7176-8453
Isabelle Martin-VerstraeteLaboratoire Pathogenèses des Bactéries Anaérobies, Institut Pasteur, Université de Paris, Paris, France.ORCID 0000-0002-8376-7690
Daniel GautheretUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.ORCID 0000-0002-1508-8469
Claire Toffano-NiocheUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.ORCID 0000-0003-4134-6844
Olga SoutourinaUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.ORCID 0000-0001-6439-7228
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noncoding RNAs (ncRNA) have emerged as important components of regulatory networks governing bacterial physiology and virulence. Previous deep-sequencing analysis identified a large diversity of ncRNAs in the human enteropathogen

Indexed as

Gene Expression Regulation, BacterialVirulenceClostridioidesClostridioides difficileGenome, BacterialHost Factor 1 ProteinHumansRNA, BacterialSpores, BacterialHost Factor 1 ProteinRNA, Bacterialcis-antisense RNACRISPRHfq RNA chaperone proteinriboswitchsmall noncoding RNAsporulationtoxin-antitoxin

Identifiers

PMID33629931
PMCPMC8583004
OpenAlexW3131713253

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.