Evidence map›Paper›PMID 33629859›Full record

ArticleThe journal of physical chemistry letters2021

Aptamer Conjugated Gold Nanostar-Based Distance-Dependent Nanoparticle Surface Energy Transfer Spectroscopy for Ultrasensitive Detection and Inactivation of Corona Virus.

Avijit Pramanik, Ye Gao, Shamily Patibandla, Dipanwita Mitra, Martin G McCandless, Lauren A Fassero, Kalein Gates, Ritesh Tandon, Paresh Chandra Ray

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

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  13. Aptamer-based biosensors for virus protein detection.Trends in analytical chemistry : TRAC · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Avijit PramanikDepartment of Chemistry and Biochemistry, Jackson State University, Jackson, Mississippi 39217, United States.ORCID http://orcid.org/0000-0002-4623-2099
Ye GaoDepartment of Chemistry and Biochemistry, Jackson State University, Jackson, Mississippi 39217, United States.
Shamily PatibandlaDepartment of Chemistry and Biochemistry, Jackson State University, Jackson, Mississippi 39217, United States.
Dipanwita MitraDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi 39216, United States.ORCID http://orcid.org/0000-0002-4413-0195
Martin G McCandlessDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi 39216, United States.
Lauren A FasseroDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi 39216, United States.
Kalein GatesDepartment of Chemistry and Biochemistry, Jackson State University, Jackson, Mississippi 39217, United States.
Ritesh TandonDepartment of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi 39216, United States.
Paresh Chandra RayDepartment of Chemistry and Biochemistry, Jackson State University, Jackson, Mississippi 39217, United States.ORCID http://orcid.org/0000-0001-5398-9930

Funding

Strengthening the Biomedical Data Science Training Program at Jackson State UniversityU54MD015929 · NIMHD · JACKSON STATE UNIVERSITY · PI PAYTON, MARINELLE · 2020 to 2024
$12.1M
NIMHD NIH HHS U54 MD015929
6 · The paper itself

Abstract

The ongoing outbreak of the coronavirus infection has killed more than 2 million people. Herein, we demonstrate that Rhodamine 6G (Rh-6G) dye conjugated DNA aptamer-attached gold nanostar (GNS)-based distance-dependent nanoparticle surface energy transfer (NSET) spectroscopy has the capability of rapid diagnosis of specific SARS-CoV-2 spike recombinant antigen or SARS-CoV-2 spike protein pseudotyped baculovirus within 10 min. Because Rh-6G-attached single-stand DNA aptamer wrapped the GNS, 99% dye fluorescence was quenched because of the NSET process. In the presence of spike antigen or virus, the fluorescence signal persists because of the aptamer-spike protein binding. Specifically, the limit of detection for the NSET assay has been determined to be 130 fg/mL for antigen and 8 particles/mL for virus. Finally, we have demonstrated that DNA aptamer-attached GNSs can stop virus infection by blocking the angiotensin-converting enzyme 2 (ACE2) receptor binding capability and destroying the lipid membrane of the virus.

Indexed as

Angiotensin-Converting Enzyme 2Antigens, ViralAptamers, NucleotideBiosensing TechniquesCOVID-19COVID-19 TestingEnergy TransferGoldHumansLimit of DetectionMetal NanoparticlesProtein BindingSARS-CoV-2Spike Glycoprotein, CoronavirusACE2 protein, humanAngiotensin-Converting Enzyme 2Antigens, ViralAptamers, NucleotideGoldSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID33629859
PMCPMC7927280

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.