Evidence map›Paper›PMID 33629199›Full record

ArticleFunctional & integrative genomics2021

Comparative proteomic and transcriptomic analysis reveals high pH-induced expression signatures of Chinese shrimp Fenneropenaeus chinensis.

Zhaoxia Li, Xiaoqi Tang, Jian Li, Yuying He

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Zhaoxia LiSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Xiaoqi TangSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Jian LiKey Laboratory of Sustainable Development of Marine Fisheries, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, People's Republic of China.
Yuying HeKey Laboratory of Sustainable Development of Marine Fisheries, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, People's Republic of China. heyy@ysfri.ac.cn.ORCID http://orcid.org/0000-0001-6549-2825
Qingdao Agricultural University · CNQingdao National Laboratory for Marine Science and Technology · CN

Funding

the China Agriculture Research System CARS-48the National Natural Science Foundation of China 31772842
6 · The paper itself

Abstract

pH has a great impact on the distribution, growth, behavior, and physiology in many aquatic animals. The comparison of proteomics between normal and high pH stress samples was successfully achieved using iTRAQ proteomic analysis to screen key response proteins and pathways. After high pH stress, 124 upregulated and 41 downregulated proteins were identified. The higher expression levels of proteins like citrate synthase, glutathione S-transferase, glutathione peroxidase, and cytochrome c oxidase are associated with oxidative stress and mitochondrial dysfunction. The upregulation of glucose-regulated protein 78 indicated that the endoplasmic reticulum stress is induced by high pH stress. There were significant upregulation expressions of V-type H

Indexed as

Gene Expression Profiling14-3-3 ProteinsAnimalsATP-Binding Cassette TransportersChinaGene Expression RegulationHydrogen-Ion ConcentrationPenaeidaeProteomeSodium-Potassium-Exchanging ATPaseTranscriptomeVacuolar Proton-Translocating ATPases14-3-3 ProteinsATP-Binding Cassette TransportersProteomeSodium-Potassium-Exchanging ATPaseVacuolar Proton-Translocating ATPasesFenneropenaeus chinensisHigh pH stresssiTRAQ proteomicRNA-seq transcriptomic

Identifiers

PMID33629199
OpenAlexW3129245559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.