Evidence map›Paper›PMID 33629144›Full record

ArticleProtoplasma2021

Transcriptome-wide identification of squalene epoxidase genes from Glycyrrhiza glabra L.: expression analysis and heterologous expression of GgSQE1 suggest important role in terpenoid biosynthesis.

Malik Muzafar Manzoor, Pooja Goyal, Pankaj Pandotra, Mohd Saleem Dar, Mohd Jamal Dar, Prashant Misra, Ajai P Gupta, Ram A Vishwakarma, Ashok Ahuja, Manoj K Dhar and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Protoplasma, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Genes and Regulatory Mechanisms for Ginsenoside Biosynthesis.Journal of plant biology = Singmul Hakhoe chi · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Malik Muzafar Manzoor *Plant Biotechnology Division, CSIR-IIIM, Jammu, India.
Pooja Goyal *Plant Biotechnology Division, CSIR-IIIM, Jammu, India.
Pankaj PandotraPlant Biotechnology Division, CSIR-IIIM, Jammu, India.
Mohd Saleem DarCouncil of Scientific and Industrial Research (CSIR), Indian Institute of Integrative Medicine, Canal Road, Jammu, ,180001, India.
Mohd Jamal DarCouncil of Scientific and Industrial Research (CSIR), Indian Institute of Integrative Medicine, Canal Road, Jammu, ,180001, India.
Prashant MisraPlant Biotechnology Division, CSIR-IIIM, Jammu, India. pmisra@iiim.ac.in.
Ajai P GuptaCouncil of Scientific and Industrial Research (CSIR), Indian Institute of Integrative Medicine, Canal Road, Jammu, ,180001, India.
Ram A VishwakarmaCouncil of Scientific and Industrial Research (CSIR), Indian Institute of Integrative Medicine, Canal Road, Jammu, ,180001, India.
Ashok AhujaCouncil of Scientific and Industrial Research (CSIR), Indian Institute of Integrative Medicine, Canal Road, Jammu, ,180001, India.
Manoj K DharGenome Research Laboratory, School of Biotechnology, University of Jammu, Jammu, India.
Suphla GuptaPlant Biotechnology Division, CSIR-IIIM, Jammu, India. suphlabg@gmail.com.ORCID http://orcid.org/0000-0001-6688-5575
Indian Institute of Integrative Medicine · INPurdue University West Lafayette · USSher-e-Kashmir University of Agricultural Sciences and Technology of Jammu · INUniversity of Jammu · IN

Funding

Science and Engineering Research Board SERB/SB/SO/PS/90/2013
6 · The paper itself

Abstract

Squalene epoxidase (SQE) is a crucial regulatory enzyme for the biosynthesis of several important classes of compounds including sterols and triterpenoids. The present paper identified and characterised five SQE genes (GgSQE1 to GgSQE5) from Glycyrrhiza glabra through transcriptome data mining and homology-based cloning, for the first time. The phylogenetic analysis implied their functional divergence. The ORF corresponding to one of the five SQEs, namely, GgSQE1, was cloned and studied for its function in a heterologous system, following transient and stable expressions. The transient expression followed by GgSQE1 encoding protein purification suggested approximately 58.0-kDa protein following the predicted molecular mass of the deduced protein. The gene expression profiling based on qRT-PCR indicated its highest expression (6.4-folds) in the 10-month-old roots. Furthermore, ABA (12.4-folds) and GA

Indexed as

GlycyrrhizaTriterpenesPhylogenySqualene MonooxygenaseTranscriptomeSqualene MonooxygenaseTriterpenesCloningFunctional characterisationGlycyrrhiza glabraSqualene epoxidase

Identifiers

PMID33629144
PMCPMC7904238
OpenAlexW3131370069

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.