Evidence map›Paper›PMID 33628839›Full record

ArticleJournal of diabetes research2021

Based on Network Pharmacology Tools to Investigate the Molecular Mechanism of Cordyceps sinensis on the Treatment of Diabetic Nephropathy.

Yan Li, Lei Wang, Bojun Xu, Liangbin Zhao, Li Li, Keyang Xu, Anqi Tang, Shasha Zhou, Lu Song, Xiao Zhang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of diabetes research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yan LiHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Lei WangKey Laboratory of Chinese Internal Medicine of Ministry of Education and Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing 100700, China.
Bojun XuHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Liangbin ZhaoHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Li LiHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Keyang XuZhejiang Chinese Medical University, Hangzhou, 310053 Zhejiang, China.
Anqi TangHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Shasha ZhouHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Lu SongHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Xiao ZhangHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.
Huakui ZhanHospital of Chengdu University of Traditional Chinese Medicine, Chengdu, 610072 Sichuan, China.ORCID https://orcid.org/0000-0003-2210-8728
Beijing University of Chinese Medicine · CNZhejiang Chinese Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDiabetic nephropathy (DN) is one of the most common complications of diabetes mellitus and is a major cause of end-stage kidney disease. Cordyceps sinensis (Cordyceps, Dong Chong Xia Cao) is a widely applied ingredient for treating patients with DN in China, while the molecular mechanisms remain unclear. This study is aimed at revealing the therapeutic mechanisms of Cordyceps in DN by undertaking a network pharmacology analysis. MATERIALS AND

methodsIn this study, active ingredients and associated target proteins of Cordyceps sinensis were obtained via Traditional Chinese Medicine Systems Pharmacology Database (TCMSP) and Swiss Target Prediction platform, then reconfirmed by using PubChem databases. The collection of DN-related target genes was based on DisGeNET and GeneCards databases. A DN-Cordyceps common target interaction network was carried out via the STRING database, and the results were integrated and visualized by utilizing Cytoscape software. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to determine the molecular mechanisms and therapeutic effects of Cordyceps on the treatment of DN.

resultsSeven active ingredients were screened from Cordyceps, 293 putative target genes were identified, and 85 overlapping targets matched with DN were considered potential therapeutic targets, such as TNF, MAPK1, EGFR, ACE, and CASP3. The results of GO and KEGG analyses revealed that hub targets mainly participated in the AGE-RAGE signaling pathway in diabetic complications, TNF signaling pathway, PI3K-Akt signaling pathway, and IL-17 signaling pathway. These targets were correlated with inflammatory response, apoptosis, oxidative stress, insulin resistance, and other biological processes.

conclusionsOur study showed that Cordyceps is characterized as multicomponent, multitarget, and multichannel. Cordyceps may play a crucial role in the treatment of DN by targeting TNF, MAPK1, EGFR, ACE, and CASP3 signaling and involved in the inflammatory response, apoptosis, oxidative stress, and insulin resistance.

Indexed as

Medicine, Chinese TraditionalAnimalsCordycepsDatabases, GeneticDiabetic NephropathiesGene Expression ProfilingGene Regulatory NetworksHumansHypoglycemic AgentsProtein Interaction MapsSignal TransductionTranscriptomeHypoglycemic Agents

Identifiers

PMID33628839
PMCPMC7884116
OpenAlexW3128591417

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.