Evidence map›Paper›PMID 33626103›Full record

ArticlePloS one2021

Effect size, sample size and power of forced swim test assays in mice: Guidelines for investigators to optimize reproducibility.

Neil R Smalheiser, Elena E Graetz, Zhou Yu, Jing Wang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. In Vivo Analysis of Extract of Leaves of Mistletoe as aVeterinary medicine international · 2022
    Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Neil R SmalheiserDepartment of Psychiatry, University of Illinois School of Medicine, Chicago, Illinois, United States of America.ORCID 0000-0003-1079-3406
Elena E GraetzDepartment of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Zhou YuDepartment of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Jing WangDepartment of Mathematics, Statistics, and Computer Science, University of Illinois at Chicago, Chicago, Illinois, United States of America.
University of Illinois Chicago · US

Funding

LIFE CYCLE EVENTS, PRODUCTIVITY, AND SCIENTIFIC IMPACTP01AG039347 · NIA · NATIONAL BUREAU OF ECONOMIC RESEARCH · PI WEINBERG, BRUCE A · 2013 to 2018
$5.4M
Text Mining Pipeline to Accelerate Systematic Reviews in Evidence-Based MedicineR01LM010817 · NLM · UNIVERSITY OF ILLINOIS AT CHICAGO · PI COHEN, AARON M., SMALHEISER, NEIL R · 2010 to 2019
$4.5M
NIA NIH HHS P01 AG039347NLM NIH HHS R01 LM010817
6 · The paper itself

Abstract

A recent flood of publications has documented serious problems in scientific reproducibility, power, and reporting of biomedical articles, yet scientists persist in their usual practices. Why? We examined a popular and important preclinical assay, the Forced Swim Test (FST) in mice used to test putative antidepressants. Whether the mice were assayed in a naïve state vs. in a model of depression or stress, and whether the mice were given test agents vs. known antidepressants regarded as positive controls, the mean effect sizes seen in the experiments were indeed extremely large (1.5-2.5 in Cohen's d units); most of the experiments utilized 7-10 animals per group which did have adequate power to reliably detect effects of this magnitude. We propose that this may at least partially explain why investigators using the FST do not perceive intuitively that their experimental designs fall short-even though proper prospective design would require ~21-26 animals per group to detect, at a minimum, large effects (0.8 in Cohen's d units) when the true effect of a test agent is unknown. Our data provide explicit parameters and guidance for investigators seeking to carry out prospective power estimation for the FST. More generally, altering the real-life behavior of scientists in planning their experiments may require developing educational tools that allow them to actively visualize the inter-relationships among effect size, sample size, statistical power, and replicability in a direct and intuitive manner.

Indexed as

MiceResearch DesignAnimalsAntidepressive AgentsDepressionDrug Evaluation, PreclinicalExercise TestFemaleMalePhysical Conditioning, AnimalReproducibility of ResultsSample SizeSwimmingAntidepressive Agents

Identifiers

PMID33626103
PMCPMC7904226
OpenAlexW3132638433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.