Evidence map›Paper›PMID 33626083›Full record

ArticlePloS one2021

Transcriptome analysis of yellow passion fruit in response to cucumber mosaic virus infection.

Lijuan Chen, Donglei Sun, Xingxing Zhang, Danqing Shao, Yinglin Lu, Yuxing An

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Effects of viral infection on passion fruit (Frontiers in plant science · 2025
    Article
  7. Review
  8. The role of rhamnolipids in the growth and defense responses of passion fruit plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
  9. Genetic Dissection of ToLCNDV Resistance in Resistant Sources ofInternational journal of molecular sciences · 2024
    Article
  10. Article
  11. The Role of Plant Transcription Factors in the Fight against Plant Viruses.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lijuan ChenInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.
Donglei SunInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.
Xingxing ZhangInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.
Danqing ShaoInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.
Yinglin LuInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.
Yuxing AnInstitute of Bioengineering, Guangdong Academy of Sciences, Guangzhou, Guangdong, China.ORCID 0000-0003-3170-2809

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cultivation and production of passion fruit (Passiflora edulis) are severely affected by viral disease. Yet there have been few studies of the molecular response of passion fruit to virus attack. In the present study, RNA-based transcriptional profiling (RNA-seq) was used to identify the gene expression profiles in yellow passion fruit (Passiflora edulis f. flavicarpa) leaves following inoculation with cucumber mosaic virus (CMV). Six RNA-seq libraries were constructed comprising a total of 42.23 Gb clean data. 1,545 differentially expressed genes (DEGs) were obtained (701 upregulated and 884 downregulated). Gene annotation analyses revealed that genes associated with plant hormone signal transduction, transcription factors, protein ubiquitination, detoxification, phenylpropanoid biosynthesis, photosynthesis and chlorophyll metabolism were significantly affected by CMV infection. The represented genes activated by CMV infection corresponded to transcription factors WRKY family, NAC family, protein ubiquitination and peroxidase. Several DEGs encoding protein TIFY, pathogenesis-related proteins, and RNA-dependent RNA polymerases also were upregualted by CMV infection. Overall, the information obtained in this study enriched the resources available for research into the molecular-genetic mechanisms of the passion fruit/CMV interaction, and might provide a theoretical basis for the prevention and management of passion fruit viral disease in the field.

Indexed as

TranscriptomeCucumovirusGene Expression Regulation, PlantPassifloraPlant DiseasesPlant ProteinsTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID33626083
PMCPMC7904197

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.